Factsheet for Os03t0174600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G290300.1	Wheat	mitochondrion	81.97	82.47
EER95411	Sorghum	mitochondrion	82.38	82.21
TraesCS4D01G289400.1	Wheat	mitochondrion	81.35	81.86
TraesCS4A01G013400.2	Wheat	mitochondrion	81.35	81.02
Zm00001d027872_P001	Maize	mitochondrion	80.94	80.78
HORVU4Hr1G075740.9	Barley	mitochondrion	78.07	77.76
GSMUA_Achr1P22830_001	Banana	mitochondrion	64.34	77.72
KRH24707	Soybean	mitochondrion	43.03	66.67
Solyc09g074100.2.1	Tomato	plastid	64.14	64.67
PGSC0003DMT400009817	Potato	plastid	63.32	63.98
KRH29712	Soybean	mitochondrion	65.16	63.35
Bra030447.1-P	Field mustard	plastid	60.86	62.4
Bra014273.1-P	Field mustard	plastid	60.66	60.91
CDY65470	Canola	plastid	60.86	60.61
AT1G51310.1	Thale cress	plastid	60.66	59.56
CDY03630	Canola	plastid	60.04	59.55
VIT_06s0004g02080.t01	Wine grape	plastid	64.14	57.96
CDY29626	Canola	plastid	60.66	57.81
CDY35562	Canola	plastid	51.84	55.36
KRH38623	Soybean	extracellular	11.68	52.78
CDY03632	Canola	cytosol	13.52	52.38
CDY03633	Canola	cytosol	18.03	49.16

Protein Annotations

MapMan:16.12.3.1.1.1	Gene3D:2.30.30.280	Gene3D:2.40.30.10	Gene3D:3.40.50.620	EntrezGene:4331793	ProteinID:ABF94253.1
EMBL:AK103276	InterPro:Adenine_a_hdrlase_dom	ProteinID:BAF11043.1	ProteinID:BAS82566.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
GO:GO:0016783	InterPro:IPR014729	InterPro:IPR023382	HAMAP:MF_00144	EnsemblPlantsGene:Os03g0174600	EnsemblPlants:Os03t0174600-01
PFAM:PF03054	PANTHER:PTHR43052	UniProt:Q10R16	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	TIGRFAMs:TIGR00420
UniParc:UPI0000DB4C5B	RefSeq:XP_015631825.1	SEG:seg	InterPro:tRNA-specific_2-thiouridylase	:	:

Description

Rossmann-like alpha/beta/alpha sandwich fold domain containing protein. (Os03t0174600-01);Similar to tRNA methyltransferase. (Os03t0174600-02)

Coordinates

chr3:+:3990111..3997757

Molecular Weight (calculated)

54914.5 Da

IEP (calculated)

7.535

GRAVY (calculated)

-0.259

Length

488 amino acids

Sequence
(BLAST)

001: MLRVVSTLPA LRPLLAGSTL LLNARPLLRS RLTRRPFRAV SSSTASPSSS SSGARDFGGV DFGDERLLRC AAAGRAPLRV AVLVSGGVDS SVALRLLHAA
101: GHRCTAFYLK IWFQEDFRNF WSECPWDDDL KYAQAVCDKI DVPLEVVHLS DEYWNHVVSH IINEYRSGRT PNPDVLCNTR IKFGAFLEAI ENLGFDYIAS
201: GHYAHVVHPS PDDVEGPSVL QLSKDKVKDQ TYFLSHLSQT QLRRLLFPLG CITKDEVRRL AAQMDLPNQD RKDSQGICFL GKVKFSEFVE RQIGEMEGVL
301: LEAETGDYLG THRGFWFYTI GQRQGLRLPG GPWYVVEKGV QNNVVFVSRN YYSLDKRRRT FRVGSLNWFS NSGPTNNEQL KCKVRHSPEF HDCTVTQEQT
401: SEHGVILVVR LSEDDQGLAA GQFAAFYRDN LCLGSGIILD SWDEMNFPVC ARALEIARME DKSRLGKPVK IMNLEHIVKS EKEAIEVA

Best Arabidopsis Sequence Match ( AT1G51310.1 )
(BLAST)

001: MFSAVAKPFL SPSPPLFRLP LSSISISFRV FPSFFSSSSS SQLPSPQSSN PITPLISSNR NYSRHAFIVD QYLSCSMPEK PLRVAVLLSG GVDSSVALRL
101: LHAAGHSCTA FYLKIWFQEG FENFWNQCPW EDDLKYAKHV CEQVDVPLEV VHLTDEYWER VVSYIIEEYR CGRTPNPDVL CNTRIKFGAF MDAISDMEYD
201: YVGSGHYAKV VHPPADQNDA SSVLELSQDM VKDQTYFLSH LSQTQLKRLL FPLGCVKKDE VRKLATQFDL PNKDRKDSQG ICFLGKIKFS DFVCRHIGEM
301: EGIILEAESG DFLGNHRGFW FYTIGQRQGL RLPGGPWYVV EKDTKNNVVF VSRNYYSIDK RRRIFRVGSL RWNSGKPSGK VRELRCKVRH GPGFYSCSFE
401: MEGDGDVAVV HLDEDDQGLA AGQFAAFYEG TTCIGSGVIL ESWDDQCFPV CAKALQLAAL EDKTKLGKPV KIMTMPTMSS VEADTGEASA EQKLVNA

Arabidopsis Description

tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Source:UniProtKB/TrEMBL;Acc:F4I824]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.