CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 2
plasma membrane 4
extracellular 1
golgi 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29555	Soybean	extracellular, plasma membrane	93.9	93.58
Bra014190.1-P	Field mustard	plasma membrane	56.27	55.52
CDY16500	Canola	plasma membrane	56.27	55.52
CDX77245	Canola	plasma membrane	55.93	55.18
AT1G49470.1	Thale cress	plasma membrane	54.92	53.64
PGSC0003DMT400015915	Potato	extracellular, plasma membrane	52.88	53.24
Solyc10g050430.1.1	Tomato	extracellular, plasma membrane	52.2	52.56
VIT_03s0063g01730.t01	Wine grape	mitochondrion	64.07	50.67
GSMUA_Achr7P12360_001	Banana	plasma membrane	49.83	50.17
Os08t0462900-01	Rice	extracellular, plasma membrane	46.1	44.16
KRH11368	Soybean	extracellular	9.83	37.18
OQU80610	Sorghum	plasma membrane	41.69	35.55
KRH02131	Soybean	plasma membrane	24.07	34.47
KRH20920	Soybean	plasma membrane	32.54	31.17
KRH65232	Soybean	plasma membrane	31.53	31.1
KRH51013	Soybean	extracellular, plasma membrane	32.88	31.09
KRH51014	Soybean	extracellular, plasma membrane	32.54	31.07
KRH36022	Soybean	plasma membrane	31.53	30.59
KRH76363	Soybean	extracellular, plasma membrane	27.46	29.14
KRH39651	Soybean	plasma membrane	27.12	28.78
KRG90737	Soybean	plasma membrane	29.49	28.06
KRH07683	Soybean	extracellular	25.08	27.31

Protein Annotations

EMBL:ACUP02007178	EnsemblPlants:KRH24549	EnsemblPlantsGene:GLYMA_12G048400	EntrezGene:100808451	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF14	PFAM:PF04819	ProteinID:KRH24549
ProteinID:KRH24549.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000233D60B	UniProt:I1LQ93	MapMan:35.2

Description

hypothetical protein

Coordinates

chr12:+:3497445..3499204

Molecular Weight (calculated)

32771.1 Da

IEP (calculated)

7.686

GRAVY (calculated)

0.565

Length

295 amino acids

Sequence
(BLAST)

001: MGSFVGHAVQ GSALALLGLW NTIHTIRSYL VKGPANFTVR FWYQFNTPQS RLKHLELVSI LSFSVLAIFM QILDFPHFHY AFKLDNFEHA TMFIHLALFA
101: GFSLSTELTD SLDLFSGFVG ILASSVFSQE LFLLHFHSTD HVGLEGHYHW LLQLIVLVSL VAALAATIFP NNFNAALVLS ISVIFQGCWF INMGFMLWIP
201: AFVPEGCVMN LAKASGHEII GAVTCGSKEA DFRARGLANL QFSWILSSIL IFAGIICLKL ARKCTITTNR LEYERIQTKG AADSALANEG FKQAR

Best Arabidopsis Sequence Match ( AT1G49470.1 )
(BLAST)

001: MGTFLGHFVP GLSLALLGLW HLFNTIRSYC LKGPEAFSAK FWFPFPKLKH LELILILFFS FLSITLLTLD FPNFNFSSLK PDNLEHASMF LHLIIFACFA
101: LFCELTLCSD LFSGLIGVLS ASVFAQELFL LHFHSTDHSG LEGHYHFLLQ LIAFVSFSSA LASASFPKSF SAALFLPISV MFQGCWFLNM GFMLWIPEYV
201: PRGCVSNMST STDNNRRSVY HSGAVACESP GAEIRAKALA NLQFSWMLSA ILIITCALCL KYSGKVVLPK IRSSLEYERL CRQGSDRSAT VTVEAPASSD
301: QQ

Arabidopsis Description

At1g49470 [Source:UniProtKB/TrEMBL;Acc:Q9XIB3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.