CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 3
extracellular 3
plasma membrane 4
endoplasmic reticulum 2
vacuole 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24549	Soybean	plasma membrane	93.58	93.9
Bra014190.1-P	Field mustard	plasma membrane	55.07	54.52
CDX77245	Canola	plasma membrane	55.07	54.52
CDY16500	Canola	plasma membrane	55.07	54.52
AT1G49470.1	Thale cress	plasma membrane	54.05	52.98
PGSC0003DMT400015915	Potato	extracellular, plasma membrane	51.01	51.54
Solyc10g050430.1.1	Tomato	extracellular, plasma membrane	50.34	50.85
GSMUA_Achr7P12360_001	Banana	plasma membrane	49.32	49.83
VIT_03s0063g01730.t01	Wine grape	mitochondrion	62.5	49.6
Os08t0462900-01	Rice	extracellular, plasma membrane	44.93	43.18
KRH11368	Soybean	extracellular	10.14	38.46
OQU80610	Sorghum	plasma membrane	40.88	34.97
KRH02131	Soybean	plasma membrane	23.99	34.47
KRH51014	Soybean	extracellular, plasma membrane	32.77	31.39
KRH20920	Soybean	plasma membrane	32.43	31.17
KRH51013	Soybean	extracellular, plasma membrane	32.77	31.09
KRH65232	Soybean	plasma membrane	30.74	30.43
KRH36022	Soybean	plasma membrane	30.74	29.93
KRH76363	Soybean	extracellular, plasma membrane	27.03	28.78
KRH39651	Soybean	plasma membrane	26.69	28.42
KRG90737	Soybean	plasma membrane	29.05	27.74
KRH07683	Soybean	extracellular	25.0	27.31

Protein Annotations

EMBL:ACUP02006806	EMBL:BT096558	EnsemblPlants:KRH29555	EnsemblPlantsGene:GLYMA_11G123900	EntrezGene:100813958	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF14	PFAM:PF04819
ProteinID:KRH29555	ProteinID:KRH29555.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0001B168DB	UniProt:C6TG14
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:9420925..9422517

Molecular Weight (calculated)

33090.3 Da

IEP (calculated)

7.211

GRAVY (calculated)

0.539

Length

296 amino acids

Sequence
(BLAST)

001: MGFFVAHVVQ GSALALLGLW HTIHTIRSYL VKGPANFTVR FWYQFNTTPQ SRLKHLELVS ILSFSILAFF DQILDFPHFH YAFKLDNFEH ATMFIHLALF
101: AGFSLSTELT DSLDLFSGFV GILASSVFSQ ELFLLHFHST DHVGLEGHYH WLLQLIVLVS LVSSLAATIF PNNFNAALVL SISLIFQGCW FINMGFMLWI
201: PSFVPEGCAV NLAKPSGHEI IGAVTCSSKE ADFRARGLAN LQFSWILSSI LIFAGIICLK LSRKCTITTN RLEYERIQTK GATDSALANE GFKQAI

Best Arabidopsis Sequence Match ( AT1G49470.1 )
(BLAST)

001: MGTFLGHFVP GLSLALLGLW HLFNTIRSYC LKGPEAFSAK FWFPFPKLKH LELILILFFS FLSITLLTLD FPNFNFSSLK PDNLEHASMF LHLIIFACFA
101: LFCELTLCSD LFSGLIGVLS ASVFAQELFL LHFHSTDHSG LEGHYHFLLQ LIAFVSFSSA LASASFPKSF SAALFLPISV MFQGCWFLNM GFMLWIPEYV
201: PRGCVSNMST STDNNRRSVY HSGAVACESP GAEIRAKALA NLQFSWMLSA ILIITCALCL KYSGKVVLPK IRSSLEYERL CRQGSDRSAT VTVEAPASSD
301: QQ

Arabidopsis Description

At1g49470 [Source:UniProtKB/TrEMBL;Acc:Q9XIB3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.