Factsheet for GSMUA_Achr7P12360_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 3
plasma membrane 5
golgi 2
endoplasmic reticulum 2
vacuole 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0462900-01	Rice	extracellular, plasma membrane	57.68	54.87
KRH24549	Soybean	plasma membrane	50.17	49.83
KRH29555	Soybean	extracellular, plasma membrane	49.83	49.32
PGSC0003DMT400015915	Potato	extracellular, plasma membrane	47.44	47.44
Bra014190.1-P	Field mustard	plasma membrane	48.12	47.16
CDY16500	Canola	plasma membrane	48.12	47.16
CDX77245	Canola	plasma membrane	47.78	46.82
OQU80610	Sorghum	plasma membrane	55.29	46.82
Solyc10g050430.1.1	Tomato	extracellular, plasma membrane	46.76	46.76
AT1G49470.1	Thale cress	plasma membrane	47.78	46.36
VIT_03s0063g01730.t01	Wine grape	mitochondrion	50.85	39.95
GSMUA_Achr3P07810_001	Banana	extracellular, plasma membrane	37.2	35.05
GSMUA_Achr7P18580_001	Banana	extracellular, plasma membrane, vacuole	32.08	34.43
GSMUA_Achr5P23140_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	36.52	34.29
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	30.03	32.84
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	27.3	26.67
GSMUA_Achr8P20200_001	Banana	plasma membrane	24.57	23.0

Protein Annotations

EnsemblPlants:GSMUA_Achr7P12360_001	EnsemblPlants:GSMUA_Achr7T12360_001	EnsemblPlantsGene:GSMUA_Achr7G12360_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF14	PFAM:PF04819	SEG:seg	TMHMM:TMhelix
UniParc:UPI000296CDA4	UniProt:M0TGX4	MapMan:35.2	:	:	:

Description

plant viral response family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G12360_001]

Coordinates

chr7:-:9878467..9879446

Molecular Weight (calculated)

31392.1 Da

IEP (calculated)

7.251

GRAVY (calculated)

0.568

Length

293 amino acids

Sequence
(BLAST)

001: MGTFVGHFVP GLAFTFLGLW HTHSTIRSYK LKGPSNFSSS TWFPFPSPIS ILHHLELYLL VSFSILAAVL QLLGSDLLTL SFNPVDFEHA TMFLHVVIYS
101: AVAIAVDVSA SETLSGLVGA LAASVFGQEL FLLHFHSTDH VGLEGHYHWL LQVIVAVSLL ATIVTTGAPN SFVAAVLRSV SVLFQGVWFI VMGFALWVPS
201: LAPKGCHAVG SGSTGHRQGA IACGTEEAGA RAVALANLQY SWTLAGISIL TAYLCLKPNI KCMEYRRLQS RGLDNSPTSG DPSEGLKQVH ASV

Best Arabidopsis Sequence Match ( AT1G49470.1 )
(BLAST)

001: MGTFLGHFVP GLSLALLGLW HLFNTIRSYC LKGPEAFSAK FWFPFPKLKH LELILILFFS FLSITLLTLD FPNFNFSSLK PDNLEHASMF LHLIIFACFA
101: LFCELTLCSD LFSGLIGVLS ASVFAQELFL LHFHSTDHSG LEGHYHFLLQ LIAFVSFSSA LASASFPKSF SAALFLPISV MFQGCWFLNM GFMLWIPEYV
201: PRGCVSNMST STDNNRRSVY HSGAVACESP GAEIRAKALA NLQFSWMLSA ILIITCALCL KYSGKVVLPK IRSSLEYERL CRQGSDRSAT VTVEAPASSD
301: QQ

Arabidopsis Description

At1g49470 [Source:UniProtKB/TrEMBL;Acc:Q9XIB3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.