Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037263_P001 | Maize | plasma membrane | 47.6 | 49.5 |
| OQU76145 | Sorghum | extracellular, plasma membrane, plastid | 47.28 | 49.17 |
| TraesCS7D01G197200.1 | Wheat | extracellular, plasma membrane | 47.28 | 48.52 |
| TraesCS7B01G101400.1 | Wheat | plasma membrane | 46.96 | 48.2 |
| TraesCS7A01G195700.1 | Wheat | plasma membrane | 46.33 | 47.54 |
| Os06t0238900-01 | Rice | extracellular, plasma membrane | 46.65 | 47.25 |
| HORVU7Hr1G039900.1 | Barley | extracellular, mitochondrion, plastid | 46.65 | 43.07 |
| VIT_14s0066g01930.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 43.13 | 42.45 |
| Solyc02g087260.1.1 | Tomato | plasma membrane | 43.45 | 40.48 |
| CDY49048 | Canola | plasma membrane | 40.58 | 40.32 |
| CDY37527 | Canola | endoplasmic reticulum, extracellular, plasma membrane, plastid | 40.26 | 40.0 |
| PGSC0003DMT400003263 | Potato | plasma membrane | 42.81 | 39.88 |
| AT3G01360.1 | Thale cress | extracellular, plasma membrane, plastid | 40.58 | 39.81 |
| Bra039124.1-P | Field mustard | plasma membrane | 39.62 | 39.37 |
| GSMUA_Achr3P07810_001 | Banana | extracellular, plasma membrane | 24.92 | 25.08 |
| GSMUA_Achr7P12360_001 | Banana | plasma membrane | 23.0 | 24.57 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 19.81 | 23.13 |
| GSMUA_Achr7P18580_001 | Banana | extracellular, plasma membrane, vacuole | 19.49 | 22.34 |
| GSMUA_Achr5P23140_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 21.73 | 21.79 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 20.13 | 21.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P20200_001 | EnsemblPlants:GSMUA_Achr8T20200_001 | EnsemblPlantsGene:GSMUA_Achr8G20200_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF716_TMEM45 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF9 | PFAM:PF04819 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000294C7E0 | UniProt:M0TS23 | MapMan:35.2 | : | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G20200_001]
Coordinates
chr8:-:25238437..25239605
Molecular Weight (calculated)
33451.6 Da
IEP (calculated)
6.227
GRAVY (calculated)
0.460
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLFAFSLA GLGFLFLGAI ESLSISTAPA LLPPPLLLRL RFISALLLSS LSLLSSLVSS LSSAESAADP LGPSLPLSSL TAAAPFLLYS LAGLLSLPSS
101: SLLVNPFPSS LLDLVLLFSF GQEFLLFHFR RKDLDGVENR YFDLLLVPIL VCAISTLLAI ARPRSPAPCV ARAAGLAFHG TWLIQMGFSF FTNLIAHGCS
201: VHERSATNYT IKCKTHEDYH RGRAIATLQF NCHLAFLMLV GAVAYGVLAG RTGGNAGYRP LSKELQMTDA SPSNFTLDSD EEEEIEAAET KGTKQHQDVV
301: LPVVEIESAN GSH
101: SLLVNPFPSS LLDLVLLFSF GQEFLLFHFR RKDLDGVENR YFDLLLVPIL VCAISTLLAI ARPRSPAPCV ARAAGLAFHG TWLIQMGFSF FTNLIAHGCS
201: VHERSATNYT IKCKTHEDYH RGRAIATLQF NCHLAFLMLV GAVAYGVLAG RTGGNAGYRP LSKELQMTDA SPSNFTLDSD EEEEIEAAET KGTKQHQDVV
301: LPVVEIESAN GSH
001: MGILSYAVAG GGFAVIGAWE SLDSSNLDPN SSSGTADSSS PMAQIRASPP KSVGSSSIPV ALLSSLFIAN SFFSFFSSIG SRDRVGSMIQ LQIVAVAVLF
101: LYYAILTYLV NSKNAVFVAL PSSITTLLLL FGFIEEFLMF YLQKKDVSGI ENRYYDLMLV PIAICVFSTV FELKSDSSTH RFAKLGRGIG LILQGTWFLQ
201: MGVSFFTGLI TNNCTFHEKS RGNFTIKCKG HGDYHRAKAI ATLQFNCHLA LMVVVATGLF SVIANKNGYL RQDHSKYRPL GAELENLSTF TLDSDEEDEV
301: REESNVAKEV GLNGNSSHD
101: LYYAILTYLV NSKNAVFVAL PSSITTLLLL FGFIEEFLMF YLQKKDVSGI ENRYYDLMLV PIAICVFSTV FELKSDSSTH RFAKLGRGIG LILQGTWFLQ
201: MGVSFFTGLI TNNCTFHEKS RGNFTIKCKG HGDYHRAKAI ATLQFNCHLA LMVVVATGLF SVIANKNGYL RQDHSKYRPL GAELENLSTF TLDSDEEDEV
301: REESNVAKEV GLNGNSSHD
Arabidopsis Description
At3g01360 [Source:UniProtKB/TrEMBL;Acc:Q9SRI3]
SUBAcon: [plasma membrane,plastid,extracellular]
SUBAcon: [plasma membrane,plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.