Factsheet for Bra039124.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
extracellular 3
plasma membrane 5
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37527	Canola	endoplasmic reticulum, extracellular, plasma membrane, plastid	98.1	98.1
CDY49048	Canola	plasma membrane	92.06	92.06
AT3G01360.1	Thale cress	extracellular, plasma membrane, plastid	85.08	84.01
VIT_14s0066g01930.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	52.06	51.57
Solyc02g087260.1.1	Tomato	plasma membrane	50.48	47.32
PGSC0003DMT400003263	Potato	plasma membrane	50.16	47.02
GSMUA_Achr8P20200_001	Banana	plasma membrane	39.37	39.62
OQU76145	Sorghum	extracellular, plasma membrane, plastid	34.92	36.54
TraesCS7B01G101400.1	Wheat	plasma membrane	34.6	35.74
TraesCS7A01G195700.1	Wheat	plasma membrane	34.6	35.74
TraesCS7D01G197200.1	Wheat	extracellular, plasma membrane	34.29	35.41
Zm00001d037263_P001	Maize	plasma membrane	33.65	35.22
Os06t0238900-01	Rice	extracellular, plasma membrane	33.97	34.63
HORVU7Hr1G039900.1	Barley	extracellular, mitochondrion, plastid	33.65	31.27
Bra033853.1-P	Field mustard	extracellular, plasma membrane	16.19	19.32
Bra011903.1-P	Field mustard	cytosol	13.97	19.05
Bra030875.1-P	Field mustard	extracellular, plasma membrane	18.1	18.45
Bra014190.1-P	Field mustard	plasma membrane	17.14	18.06
Bra020070.1-P	Field mustard	extracellular, plasma membrane	15.56	16.23

Protein Annotations

EnsemblPlants:Bra039124.1	EnsemblPlants:Bra039124.1-P	EnsemblPlantsGene:Bra039124	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF9	PFAM:PF04819	SEG:seg	TMHMM:TMhelix
UniParc:UPI000254776E	UniProt:M4FDF3	MapMan:35.2	:	:	:

Description

AT3G01360 (E=2e-107) | unknown protein

Coordinates

chrA05:-:23851003..23851950

Molecular Weight (calculated)

34209.0 Da

IEP (calculated)

6.599

GRAVY (calculated)

0.200

Length

315 amino acids

Sequence
(BLAST)

001: MGILSYAVAG GGFAVIGAWE SLDSSNLDPN PSSPTADQIT PSPPKSTGSS STPVALLSSL FIANSIYSFF SSIGSSDRVG SMLQLQILAV AVLFLVYAVV
101: THLVNSKNGS FAALPSSITS LLLLFGFIEE FLMFYLQKKD TSGIENRYYD LMLVPIAICV FSTVFELKSD STTHRFAKLG RGVGLILQGT WFLQMGISFF
201: TGLITNNCSF HEKSRGNFTV KCKGHGDYHR AKAIATLQFN CHLALMVVLA TALFSVVASK KGFLREDHSK YRPLGAEMEN LSNFTLDSDE EEDEVRQDNH
301: VAKETALNGI ISSHA

Best Arabidopsis Sequence Match ( AT3G01360.2 )
(BLAST)

001: MGILSYAVAG GGFAVIGAWE SLDSSNLDPN SSSGTADSSS PMAQIRASPP KSVGSSSIPV ALLSSLFIAN SFFSFFSSIG SRDRVGSMIQ LQIVAVAVLF
101: LYYAILTYLV NSKNAVFVAL PSSITTLLLL FGFIEEFLMF YLQKKDVSGI ENRYYDLMLV PIAICVFSTV FELKSDSSTH RFAKLGRGIG LILQGTWFLQ
201: MGVSFFTGLI TNNCTFHEKS RGNFTIKCKG HGDYHRAKAI ATLQFNCHLA LMVVVATGLF SVIANKNGYL RQDHSKYRPL GAELENLSTF TLDSDEEDEV
301: REESNVAKEV GLNGNSSHD

Arabidopsis Description

At3g01360 [Source:UniProtKB/TrEMBL;Acc:Q9SRI3]
SUBAcon: [plasma membrane,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.