Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35545 | Canola | extracellular, plasma membrane | 96.97 | 98.46 |
| AT1G32127.1 | Thale cress | plasma membrane | 94.32 | 94.32 |
| KRH76363 | Soybean | extracellular, plasma membrane | 74.24 | 70.5 |
| KRH39651 | Soybean | plasma membrane | 73.86 | 70.14 |
| PGSC0003DMT400079341 | Potato | extracellular, plasma membrane | 70.83 | 68.25 |
| Solyc08g075970.2.1 | Tomato | extracellular, plasma membrane | 70.45 | 67.88 |
| KRH07683 | Soybean | extracellular | 67.8 | 66.05 |
| VIT_06s0009g01520.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 29.55 | 65.0 |
| VIT_03s0063g02210.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, mitochondrion | 21.97 | 64.44 |
| VIT_02s0033g00010.t01 | Wine grape | extracellular, plasma membrane | 37.5 | 61.88 |
| VIT_02s0033g00020.t01 | Wine grape | endoplasmic reticulum, extracellular | 23.86 | 60.58 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 65.53 | 57.67 |
| TraesCS2A01G193200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 54.92 | 57.54 |
| TraesCS3D01G457800.1 | Wheat | plasma membrane | 57.58 | 52.23 |
| TraesCS2D01G194300.1 | Wheat | plasma membrane | 57.58 | 52.23 |
| TraesCS3B01G507100.1 | Wheat | plasma membrane | 57.2 | 51.89 |
| TraesCS3A01G463700.1 | Wheat | plasma membrane | 57.2 | 51.19 |
| TraesCSU01G182600.1 | Wheat | extracellular, plasma membrane, vacuole | 49.62 | 50.78 |
| TraesCS2B01G624500.1 | Wheat | extracellular, plasma membrane, vacuole | 49.62 | 50.78 |
| HORVU3Hr1G099300.14 | Barley | extracellular | 57.58 | 49.84 |
| Zm00001d048804_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 55.68 | 49.66 |
| EES10142 | Sorghum | extracellular, plasma membrane, plastid | 55.68 | 49.33 |
| HORVU5Hr1G077170.1 | Barley | extracellular | 26.14 | 49.29 |
| TraesCS2B01G487900.1 | Wheat | plasma membrane | 53.41 | 48.96 |
| Zm00001d036834_P002 | Maize | plasma membrane | 53.41 | 48.79 |
| EES15542 | Sorghum | extracellular, plasma membrane | 53.79 | 48.14 |
| TraesCS2A01G466000.1 | Wheat | plasma membrane | 53.03 | 48.11 |
| TraesCS2A01G465800.1 | Wheat | plasma membrane | 52.27 | 47.92 |
| Os11t0621000-01 | Rice | extracellular, plasma membrane | 55.68 | 47.57 |
| TraesCSU01G181800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 51.14 | 47.54 |
| TraesCSU01G010600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 51.14 | 47.54 |
| Zm00001d048859_P001 | Maize | plasma membrane | 50.38 | 47.0 |
| TraesCS2D01G466300.1 | Wheat | plasma membrane | 51.89 | 46.92 |
| HORVU1Hr1G038410.1 | Barley | extracellular, plasma membrane | 30.68 | 46.55 |
| TraesCSU01G212900.1 | Wheat | plasma membrane | 51.52 | 44.16 |
| HORVU2Hr1G036130.2 | Barley | extracellular | 28.79 | 40.0 |
| HORVU2Hr1G124140.1 | Barley | cytosol, mitochondrion | 39.77 | 36.08 |
| Bra030875.1-P | Field mustard | extracellular, plasma membrane | 30.68 | 26.21 |
| Bra020070.1-P | Field mustard | extracellular, plasma membrane | 29.17 | 25.5 |
| Bra014190.1-P | Field mustard | plasma membrane | 28.79 | 25.42 |
| Bra011903.1-P | Field mustard | cytosol | 17.05 | 19.48 |
| Bra039124.1-P | Field mustard | plasma membrane | 19.32 | 16.19 |
Protein Annotations
| EnsemblPlants:Bra033853.1 | EnsemblPlants:Bra033853.1-P | EnsemblPlantsGene:Bra033853 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF716_TMEM45 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF43 | PFAM:PF04819 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002548135 | UniProt:M4EYG1 | MapMan:35.2 | : | : | : |
Description
AT1G32120 (E=6e-138) | unknown protein
Coordinates
chrA05:-:14480462..14481328
Molecular Weight (calculated)
29183.0 Da
IEP (calculated)
6.972
GRAVY (calculated)
0.777
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSFKGHALP GTLFLVVGVW HIWSSVVRFI SNPNSFRVRV WHPLPAFNDR FKCLELYVVT IGSFIDLCIE FFYSTHLNFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGLIAL LSEKTRLLPL PQEALCLIAA TAFTAEGLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCGLKENSVV CRSVDSVVSG EFLANFQLFS LVLAVLVCLV GSYVFAASRF GVSS
101: MFFILGLIAL LSEKTRLLPL PQEALCLIAA TAFTAEGLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCGLKENSVV CRSVDSVVSG EFLANFQLFS LVLAVLVCLV GSYVFAASRF GVSS
001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
Arabidopsis Description
Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.