Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G457800.1 | Wheat | plasma membrane | 96.22 | 96.22 |
| TraesCS3A01G463700.1 | Wheat | plasma membrane | 96.22 | 94.92 |
| HORVU3Hr1G099300.14 | Barley | extracellular | 91.41 | 87.21 |
| Os11t0621000-01 | Rice | extracellular, plasma membrane | 79.04 | 74.43 |
| TraesCS2B01G487900.1 | Wheat | plasma membrane | 64.26 | 64.93 |
| TraesCS2B01G624500.1 | Wheat | extracellular, plasma membrane, vacuole | 56.7 | 63.95 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 62.89 | 61.0 |
| KRH76363 | Soybean | extracellular, plasma membrane | 57.73 | 60.43 |
| KRH39651 | Soybean | plasma membrane | 56.36 | 58.99 |
| VIT_06s0009g01520.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 24.05 | 58.33 |
| CDY35545 | Canola | extracellular, plasma membrane | 51.89 | 58.08 |
| CDY29937 | Canola | plasma membrane | 52.58 | 57.95 |
| AT1G32127.1 | Thale cress | plasma membrane | 52.23 | 57.58 |
| Bra033853.1-P | Field mustard | extracellular, plasma membrane | 51.89 | 57.2 |
| KRH07683 | Soybean | extracellular | 52.58 | 56.46 |
| VIT_02s0033g00010.t01 | Wine grape | extracellular, plasma membrane | 30.93 | 56.25 |
| PGSC0003DMT400079341 | Potato | extracellular, plasma membrane | 52.92 | 56.2 |
| VIT_03s0063g02210.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, mitochondrion | 17.18 | 55.56 |
| Solyc08g075970.2.1 | Tomato | extracellular, plasma membrane | 52.23 | 55.47 |
| VIT_02s0033g00020.t01 | Wine grape | endoplasmic reticulum, extracellular | 17.18 | 48.08 |
| TraesCS5B01G229500.1 | Wheat | plasma membrane | 27.84 | 25.71 |
| TraesCS5B01G229600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 27.49 | 25.24 |
| TraesCS7B01G101400.1 | Wheat | plasma membrane | 20.27 | 19.34 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G507100.1 | EnsemblPlantsGene:TraesCS3B01G507100 | InterPro:DUF716_TMEM45 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF43 | PFAM:PF04819 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3B:+:750860852..750863739
Molecular Weight (calculated)
31055.6 Da
IEP (calculated)
5.781
GRAVY (calculated)
0.532
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSFKGHVLP GTLFLAVGAW HVWAAVARFA MDPAGFRLRV WNPVGAGGGA LRHLELYVIA GGAFLDMCVE VLYSTHLHIF APGGGVNPAH LNDLEHGGML
101: LMFFLVGALA LLSENTRYLP LTEGALCLLA ATAFTAELLL FYFHSTTHQG LEGYYHYLLV LLVGLCVASN VLGALLPASF PADLASGLLI TLQGLWFYQT
201: AFTLYGPMLP EGCHRDAGGD IECHGHAAGE RAEQLADFQL FAYVFLAFAY ALGCYAVAAA KYGHPDLSTV EMEHRENGGF VGSSELSSGG I
101: LMFFLVGALA LLSENTRYLP LTEGALCLLA ATAFTAELLL FYFHSTTHQG LEGYYHYLLV LLVGLCVASN VLGALLPASF PADLASGLLI TLQGLWFYQT
201: AFTLYGPMLP EGCHRDAGGD IECHGHAAGE RAEQLADFQL FAYVFLAFAY ALGCYAVAAA KYGHPDLSTV EMEHRENGGF VGSSELSSGG I
001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
Arabidopsis Description
Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.