Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH39651 | Soybean | plasma membrane | 96.4 | 96.4 |
| KRH07683 | Soybean | extracellular | 75.9 | 77.86 |
| AT1G32127.1 | Thale cress | plasma membrane | 72.3 | 76.14 |
| CDY29937 | Canola | plasma membrane | 71.22 | 75.0 |
| CDY35545 | Canola | extracellular, plasma membrane | 70.14 | 75.0 |
| VIT_03s0063g02210.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, mitochondrion | 24.1 | 74.44 |
| Bra033853.1-P | Field mustard | extracellular, plasma membrane | 70.5 | 74.24 |
| PGSC0003DMT400079341 | Potato | extracellular, plasma membrane | 69.78 | 70.8 |
| VIT_06s0009g01520.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 30.22 | 70.0 |
| Solyc08g075970.2.1 | Tomato | extracellular, plasma membrane | 68.35 | 69.34 |
| VIT_02s0033g00020.t01 | Wine grape | endoplasmic reticulum, extracellular | 25.9 | 69.23 |
| VIT_02s0033g00010.t01 | Wine grape | extracellular, plasma membrane | 38.13 | 66.25 |
| TraesCS2A01G193200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 57.19 | 63.1 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 66.55 | 61.67 |
| TraesCS3D01G457800.1 | Wheat | plasma membrane | 61.51 | 58.76 |
| HORVU5Hr1G077170.1 | Barley | extracellular | 29.5 | 58.57 |
| TraesCS3B01G507100.1 | Wheat | plasma membrane | 60.43 | 57.73 |
| TraesCS3A01G463700.1 | Wheat | plasma membrane | 60.79 | 57.29 |
| TraesCS2D01G194300.1 | Wheat | plasma membrane | 59.71 | 57.04 |
| EES10142 | Sorghum | extracellular, plasma membrane, plastid | 59.71 | 55.7 |
| HORVU3Hr1G099300.14 | Barley | extracellular | 60.43 | 55.08 |
| Os11t0621000-01 | Rice | extracellular, plasma membrane | 59.71 | 53.72 |
| Zm00001d048804_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 57.19 | 53.72 |
| TraesCSU01G182600.1 | Wheat | extracellular, plasma membrane, vacuole | 49.28 | 53.1 |
| TraesCS2B01G624500.1 | Wheat | extracellular, plasma membrane, vacuole | 49.28 | 53.1 |
| Zm00001d048859_P001 | Maize | plasma membrane | 53.96 | 53.0 |
| HORVU1Hr1G038410.1 | Barley | extracellular, plasma membrane | 32.73 | 52.3 |
| EES15542 | Sorghum | extracellular, plasma membrane | 55.04 | 51.86 |
| TraesCS2A01G465800.1 | Wheat | plasma membrane | 53.6 | 51.74 |
| TraesCS2B01G487900.1 | Wheat | plasma membrane | 53.6 | 51.74 |
| Zm00001d036834_P002 | Maize | plasma membrane | 53.6 | 51.56 |
| TraesCS2A01G466000.1 | Wheat | plasma membrane | 53.96 | 51.55 |
| TraesCS2D01G466300.1 | Wheat | plasma membrane | 53.6 | 51.03 |
| TraesCSU01G010600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 50.36 | 49.3 |
| TraesCSU01G181800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 50.36 | 49.3 |
| HORVU2Hr1G036130.2 | Barley | extracellular | 31.65 | 46.32 |
| TraesCSU01G212900.1 | Wheat | plasma membrane | 50.0 | 45.13 |
| HORVU2Hr1G124140.1 | Barley | cytosol, mitochondrion | 41.37 | 39.52 |
| KRH11368 | Soybean | extracellular | 8.27 | 29.49 |
| KRH24549 | Soybean | plasma membrane | 29.14 | 27.46 |
| KRH29555 | Soybean | extracellular, plasma membrane | 28.78 | 27.03 |
| KRH20920 | Soybean | plasma membrane | 29.86 | 26.95 |
| KRH51014 | Soybean | extracellular, plasma membrane | 29.86 | 26.86 |
| KRH02131 | Soybean | plasma membrane | 19.78 | 26.7 |
| KRH51013 | Soybean | extracellular, plasma membrane | 29.86 | 26.6 |
| KRH65232 | Soybean | plasma membrane | 26.98 | 25.08 |
| KRH36022 | Soybean | plasma membrane | 26.62 | 24.34 |
| KRG90737 | Soybean | plasma membrane | 26.62 | 23.87 |
Protein Annotations
| EMBL:ACUP02000608 | EnsemblPlants:KRH76363 | EnsemblPlantsGene:GLYMA_01G148300 | EntrezGene:100807467 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DUF716_TMEM45 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF43 | PFAM:PF04819 | ProteinID:KRH76363 |
| ProteinID:KRH76363.1 | ProteinID:KRH76364.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00023377FB | UniProt:I1J823 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:48548513..48552817
Molecular Weight (calculated)
30645.8 Da
IEP (calculated)
6.897
GRAVY (calculated)
0.617
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSFKGHALP GTLFLLVGVW HVWGSVVRYV RNPMAFQVRV WNPVPGFDGR LKHLELYVIA IGAFVDMCIE LLYSPHLKIF VGGVLNPAHM NDFEHSGMLL
101: MFFIFGVVAL LSQKTRFLPL PEGALCLLAA SAFTAEYLLF YFHSTTHKGL EGYYHTLLVF LVGLCILSSI AGALLPTSFP VDLCNGIAIA LQGLWFYQTA
201: FVLYGPMMPS GCKLRENSVT CHSIDSEVRG ELLANFQLFV AVLVVLVGTV ASYGFAASRY GSSEVRNLHA IQTELDQD
101: MFFIFGVVAL LSQKTRFLPL PEGALCLLAA SAFTAEYLLF YFHSTTHKGL EGYYHTLLVF LVGLCILSSI AGALLPTSFP VDLCNGIAIA LQGLWFYQTA
201: FVLYGPMMPS GCKLRENSVT CHSIDSEVRG ELLANFQLFV AVLVVLVGTV ASYGFAASRY GSSEVRNLHA IQTELDQD
001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
Arabidopsis Description
Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.