Factsheet for TraesCSU01G010600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G181800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	100.0	100.0
TraesCSU01G182600.1	Wheat	extracellular, plasma membrane, vacuole	80.63	88.76
TraesCSU01G212900.1	Wheat	plasma membrane	85.21	78.57
Zm00001d048859_P001	Maize	plasma membrane	72.54	72.79
HORVU2Hr1G124140.1	Barley	cytosol, mitochondrion	65.49	63.92
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	55.63	52.67
CDY35545	Canola	extracellular, plasma membrane	47.54	51.92
Bra033853.1-P	Field mustard	extracellular, plasma membrane	47.54	51.14
CDY29937	Canola	plasma membrane	47.54	51.14
AT1G32127.1	Thale cress	plasma membrane	47.18	50.76
KRH76363	Soybean	extracellular, plasma membrane	49.3	50.36
KRH39651	Soybean	plasma membrane	48.24	49.28
Solyc08g075970.2.1	Tomato	extracellular, plasma membrane	47.18	48.91
KRH07683	Soybean	extracellular	46.48	48.71
PGSC0003DMT400079341	Potato	extracellular, plasma membrane	46.83	48.54
VIT_02s0033g00020.t01	Wine grape	endoplasmic reticulum, extracellular	16.55	45.19
VIT_02s0033g00010.t01	Wine grape	extracellular, plasma membrane	25.35	45.0
VIT_06s0009g01520.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	18.66	44.17
VIT_03s0063g02210.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, mitochondrion	13.38	42.22

Protein Annotations

EnsemblPlants:TraesCSU01G010600.1	EnsemblPlantsGene:TraesCSU01G010600	InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF43	PFAM:PF04819
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrUn:+:15341647..15342574

Molecular Weight (calculated)

30696.6 Da

IEP (calculated)

6.499

GRAVY (calculated)

0.636

Length

284 amino acids

Sequence
(BLAST)

001: MGDFVGHALP GSLLLAVGLW RVWASIARFA ADPPAFRIRA WSPFSAGPRL LELYVVTGGA FLDMCMELFY SNPLRVLTGR GVDPAHLNGL EHAGMLLMFF
101: LFGALALLSH TTRYLPLSDT ALGLVFATAF TSEFLLFYFH STTHVGLEAY YHRLLLLLIG LCIAAIVLGA LLPTSFAADL GTGALIAVQG MWFFQTGFTL
201: YGPTLPAGCA RSFAAPGADA HVECPDGAVL ERAEQLANLQ LFGLVFLVFV YVLGCYSVAT ARFGHPDLTT TTNDKHVGDI ECRR

Best Arabidopsis Sequence Match ( AT1G32127.1 )
(BLAST)

001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR

Arabidopsis Description

Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.