Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G182600.1 | Wheat | extracellular, plasma membrane, vacuole | 62.2 | 70.16 |
| TraesCS2B01G624500.1 | Wheat | extracellular, plasma membrane, vacuole | 62.2 | 70.16 |
| TraesCSU01G181800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 63.92 | 65.49 |
| TraesCSU01G010600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 63.92 | 65.49 |
| TraesCSU01G212900.1 | Wheat | plasma membrane | 62.2 | 58.77 |
| Zm00001d048859_P001 | Maize | plasma membrane | 54.64 | 56.18 |
| HORVU3Hr1G099300.14 | Barley | extracellular | 47.42 | 45.25 |
| HORVU5Hr1G077170.1 | Barley | extracellular | 21.65 | 45.0 |
| HORVU1Hr1G038410.1 | Barley | extracellular, plasma membrane | 25.77 | 43.1 |
| VIT_03s0063g02210.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, mitochondrion | 13.06 | 42.22 |
| KRH76363 | Soybean | extracellular, plasma membrane | 39.52 | 41.37 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 42.61 | 41.33 |
| CDY35545 | Canola | extracellular, plasma membrane | 36.43 | 40.77 |
| KRH39651 | Soybean | plasma membrane | 38.49 | 40.29 |
| KRH07683 | Soybean | extracellular | 37.11 | 39.85 |
| CDY29937 | Canola | plasma membrane | 36.08 | 39.77 |
| Bra033853.1-P | Field mustard | extracellular, plasma membrane | 36.08 | 39.77 |
| AT1G32127.1 | Thale cress | plasma membrane | 35.74 | 39.39 |
| Solyc08g075970.2.1 | Tomato | extracellular, plasma membrane | 36.43 | 38.69 |
| PGSC0003DMT400079341 | Potato | extracellular, plasma membrane | 36.08 | 38.32 |
| HORVU2Hr1G036130.2 | Barley | extracellular | 23.37 | 35.79 |
| VIT_02s0033g00010.t01 | Wine grape | extracellular, plasma membrane | 19.59 | 35.62 |
| VIT_06s0009g01520.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 14.09 | 34.17 |
| VIT_02s0033g00020.t01 | Wine grape | endoplasmic reticulum, extracellular | 11.0 | 30.77 |
| HORVU5Hr1G066720.1 | Barley | endoplasmic reticulum | 23.02 | 20.62 |
| HORVU5Hr1G066680.1 | Barley | extracellular, plasma membrane | 20.96 | 19.18 |
| HORVU5Hr1G066700.1 | Barley | plastid | 15.12 | 17.05 |
| HORVU7Hr1G039900.1 | Barley | extracellular, mitochondrion, plastid | 15.46 | 13.27 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G124140.1 | EnsemblPlantsGene:HORVU2Hr1G124140 | InterPro:DUF716_TMEM45 | ncoils:Coil | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF43 |
| PFAM:PF04819 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:757758697..757760344
Molecular Weight (calculated)
25680.7 Da
IEP (calculated)
9.292
GRAVY (calculated)
0.485
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX RVWACIARFA ADPPAFRVRA WSPFSAGPRL LELYVVTGGA FLDMCMELFY SNPLRVLTGR GVDPAHLNGL EHAGMLLVFF
101: LFGALALLSH KTRYLPLSDA ALSLVFASAF MSEFLLFYFH STTHVGLEAY YHRLLIVIIG LCIVAVVLGA LLPASFPADL GTGVLIVLQG LWFFQTGFTL
201: YGPTLPAGCA RSFAAAGVDX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPACAPST RLRRPTTSSR RGSPRRWPCA VALLATGNKE L
101: LFGALALLSH KTRYLPLSDA ALSLVFASAF MSEFLLFYFH STTHVGLEAY YHRLLIVIIG LCIVAVVLGA LLPASFPADL GTGVLIVLQG LWFFQTGFTL
201: YGPTLPAGCA RSFAAAGVDX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPACAPST RLRRPTTSSR RGSPRRWPCA VALLATGNKE L
001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
Arabidopsis Description
Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.