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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • nucleus 1
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 4
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCSU01G182600.1 Wheat extracellular, plasma membrane, vacuole 100.0 100.0
TraesCSU01G212900.1 Wheat plasma membrane 94.19 78.9
Zm00001d048859_P001 Maize plasma membrane 75.97 69.26
HORVU2Hr1G124140.1 Barley cytosol, mitochondrion 70.16 62.2
TraesCS2B01G487900.1 Wheat plasma membrane 65.5 58.68
TraesCS3B01G507100.1 Wheat plasma membrane 63.95 56.7
CDY35545 Canola extracellular, plasma membrane 50.39 50.0
Bra033853.1-P Field mustard extracellular, plasma membrane 50.78 49.62
CDY29937 Canola plasma membrane 50.78 49.62
KRH76363 Soybean extracellular, plasma membrane 53.1 49.28
AT1G32127.1 Thale cress plasma membrane 50.39 49.24
KRH39651 Soybean plasma membrane 51.55 47.84
GSMUA_Achr11P... Banana extracellular, plasma membrane 55.43 47.67
Solyc08g075970.2.1 Tomato extracellular, plasma membrane 50.0 47.08
PGSC0003DMT400079341 Potato extracellular, plasma membrane 49.22 46.35
KRH07683 Soybean extracellular 48.45 46.13
VIT_02s0033g00010.t01 Wine grape extracellular, plasma membrane 27.52 44.38
VIT_06s0009g01520.t01 Wine grape endoplasmic reticulum, plasma membrane, plastid 20.54 44.17
VIT_03s0063g02210.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, mitochondrion 15.12 43.33
VIT_02s0033g00020.t01 Wine grape endoplasmic reticulum, extracellular 14.73 36.54
TraesCS5B01G229600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 30.62 24.92
TraesCS5B01G229500.1 Wheat plasma membrane 27.91 22.86
TraesCS7B01G101400.1 Wheat plasma membrane 20.93 17.7
Protein Annotations
EnsemblPlants:TraesCS2B01G624500.1EnsemblPlantsGene:TraesCS2B01G624500InterPro:DUF716_TMEM45PANTHER:PTHR16007PANTHER:PTHR16007:SF43PFAM:PF04819
SEG:segTMHMM:TMhelixMapMan:35.2:::
Description
No Description!
Coordinates
chr2B:+:797552807..797553583
Molecular Weight (calculated)
27778.2 Da
IEP (calculated)
6.587
GRAVY (calculated)
0.788
Length
258 amino acids
Sequence
(BLAST)
001: MGDFVGHALP GSLLLVVGLW RVWASIARFA TDPPAFRVRV CSSFSAGPRL LELYVVTGGA FLDMCMELFY SNPLRILTGR GVDPAHLNGG LEHAGMLLMF
101: FLFGALALLS HKTRSVSHLP LSDAALSLVF ACAFTSEFLL FYFHSTTQVG LEAYYHRLLL LIGLCIAAIV LGALLPASFP ADLGTGVLIA VQGLWFFQTG
201: FTLYGPTLPA GCARSFDAPG ADAHVECRDG PALERAEHLA IFQLFGLVFL AFVYVLGC
Best Arabidopsis Sequence Match ( AT1G32127.1 )
(BLAST)
001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
Arabidopsis Description
Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.