Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 3
- plasma membrane 3
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G236600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 95.27 | 94.97 |
| TraesCS5A01G231300.1 | Wheat | plasma membrane | 93.06 | 93.35 |
| TraesCS5A01G231100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 93.06 | 93.06 |
| EER98987 | Sorghum | endoplasmic reticulum, plasma membrane | 84.86 | 84.06 |
| Zm00001d020652_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 84.23 | 83.96 |
| HORVU5Hr1G066720.1 | Barley | endoplasmic reticulum | 81.07 | 79.08 |
| Os09t0444900-01 | Rice | peroxisome, plasma membrane | 81.39 | 73.93 |
| EER98986 | Sorghum | endoplasmic reticulum, plasma membrane | 69.72 | 71.75 |
| GSMUA_Achr5P23140_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 61.51 | 62.5 |
| GSMUA_Achr3P07810_001 | Banana | extracellular, plasma membrane | 61.2 | 62.38 |
| GSMUA_Achr7P18580_001 | Banana | extracellular, plasma membrane, vacuole | 53.31 | 61.9 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 52.05 | 61.57 |
| KRH11368 | Soybean | extracellular | 14.51 | 58.97 |
| OQU93027 | Sorghum | extracellular | 28.08 | 56.69 |
| VIT_02s0087g00750.t01 | Wine grape | extracellular, plasma membrane | 53.63 | 55.56 |
| KRH20920 | Soybean | plasma membrane | 53.63 | 55.19 |
| Solyc01g006050.2.1 | Tomato | extracellular, golgi, plasma membrane | 53.94 | 54.11 |
| PGSC0003DMT400082049 | Potato | extracellular, plasma membrane | 53.94 | 53.94 |
| Solyc04g014520.1.1 | Tomato | plasma membrane | 50.47 | 53.87 |
| KRH51013 | Soybean | extracellular, plasma membrane | 53.0 | 53.85 |
| VIT_06s0004g00960.t01 | Wine grape | extracellular, plasma membrane, vacuole | 51.42 | 53.27 |
| Solyc01g017600.2.1 | Tomato | extracellular, plasma membrane, vacuole | 52.05 | 52.88 |
| KRH51014 | Soybean | extracellular, plasma membrane | 51.1 | 52.43 |
| AT5G19870.1 | Thale cress | plasma membrane | 45.43 | 52.17 |
| CDY08230 | Canola | plasma membrane | 47.0 | 52.1 |
| AT1G55230.1 | Thale cress | plasma membrane | 48.9 | 51.67 |
| Bra030875.1-P | Field mustard | extracellular, plasma membrane | 49.84 | 51.13 |
| CDY26121 | Canola | extracellular, plasma membrane, vacuole | 50.79 | 50.95 |
| AT1G55240.1 | Thale cress | plasma membrane | 49.84 | 50.8 |
| PGSC0003DMT400048713 | Potato | extracellular, plasma membrane, vacuole | 50.16 | 50.8 |
| TraesCS5B01G229500.1 | Wheat | plasma membrane | 50.16 | 50.48 |
| KRH02131 | Soybean | plasma membrane | 32.18 | 49.51 |
| CDY10576 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.11 | 49.48 |
| CDY10579 | Canola | plasma membrane | 45.11 | 49.48 |
| CDY65755 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.11 | 49.48 |
| Bra011903.1-P | Field mustard | cytosol | 35.65 | 48.92 |
| CDY44949 | Canola | extracellular, plasma membrane | 45.43 | 47.68 |
| CDY42309 | Canola | plasma membrane | 45.11 | 47.35 |
| Bra020070.1-P | Field mustard | extracellular, plasma membrane | 45.11 | 47.35 |
| CDY10580 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 44.48 | 47.32 |
| CDY65753 | Canola | plasma membrane | 45.11 | 46.89 |
| KRH65232 | Soybean | plasma membrane | 43.85 | 46.49 |
| Solyc01g006070.2.1 | Tomato | extracellular, plasma membrane | 45.11 | 46.43 |
| KRH36022 | Soybean | plasma membrane | 44.16 | 46.05 |
| KRG90737 | Soybean | plasma membrane | 44.16 | 45.16 |
| TraesCS2B01G624500.1 | Wheat | extracellular, plasma membrane, vacuole | 24.92 | 30.62 |
| TraesCS2B01G487900.1 | Wheat | plasma membrane | 27.76 | 30.56 |
| TraesCS3B01G507100.1 | Wheat | plasma membrane | 25.24 | 27.49 |
| TraesCS7B01G101400.1 | Wheat | plasma membrane | 22.71 | 23.61 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G229600.1 | EnsemblPlantsGene:TraesCS5B01G229600 | InterPro:DUF716_TMEM45 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF27 | PFAM:PF04819 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr5B:-:406556940..406557893
Molecular Weight (calculated)
34952.5 Da
IEP (calculated)
6.317
GRAVY (calculated)
0.308
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTLVGHVAP GAGFLLIGLW QLFNHIRLFV LRPGSYVAPL WFPARGVRHL ELILIIAGTV ASILMELVIG PARHQPFDDD GTIPSDHLHN FEHASISLAL
101: LAFAAVTIHM DRVRAPMRDA VSQLVAAAAF AQELLVFHLH STDHMGVEGQ FHWLLQTVIA VTLATTLLGI PYPRSFVVSL VRSASLVLQG VWLIVMGVML
201: WTPGLVSKGC FLNHEDGHDV VRCRTDEALH RAKALVNLQF SWYLTGTMVF VVVLYLQVSR LYPEEPQYLP LVKGGHAGGR FSIGDDHEDD DDEDDLEATK
301: RGYGHVVSGG TKPMEYD
101: LAFAAVTIHM DRVRAPMRDA VSQLVAAAAF AQELLVFHLH STDHMGVEGQ FHWLLQTVIA VTLATTLLGI PYPRSFVVSL VRSASLVLQG VWLIVMGVML
201: WTPGLVSKGC FLNHEDGHDV VRCRTDEALH RAKALVNLQF SWYLTGTMVF VVVLYLQVSR LYPEEPQYLP LVKGGHAGGR FSIGDDHEDD DDEDDLEATK
301: RGYGHVVSGG TKPMEYD
001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
Arabidopsis Description
Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.