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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • plastid 4
  • vacuole 4
  • endoplasmic reticulum 4
  • plasma membrane 5
  • cytosol 1
  • extracellular 3
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020652_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 93.44 94.03
TraesCS5B01G229600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 84.06 84.86
TraesCS5A01G231100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 83.12 83.91
TraesCS5D01G236600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 83.12 83.65
TraesCS5A01G231300.1 Wheat plasma membrane 81.88 82.91
Os09t0444900-01 Rice peroxisome, plasma membrane 85.94 78.8
HORVU5Hr1G066720.1 Barley endoplasmic reticulum 77.81 76.62
EER98986 Sorghum endoplasmic reticulum, plasma membrane 73.12 75.97
TraesCS3A01G084100.1 Wheat plasma membrane 74.69 75.87
OQU80608 Sorghum endoplasmic reticulum, extracellular, plasma membrane 67.5 67.92
GSMUA_Achr7P18580_001 Banana extracellular, plasma membrane, vacuole 55.0 64.47
GSMUA_Achr5P23140_001 Banana endoplasmic reticulum, extracellular, plasma membrane 62.5 64.1
GSMUA_Achr3P07810_001 Banana extracellular, plasma membrane 62.19 63.99
GSMUA_Achr10P... Banana extracellular, plasma membrane 52.81 63.06
OQU93027 Sorghum extracellular 29.06 59.24
VIT_02s0087g00750.t01 Wine grape extracellular, plasma membrane 55.31 57.84
KRH20920 Soybean plasma membrane 55.31 57.47
Solyc01g006050.2.1 Tomato extracellular, golgi, plasma membrane 54.69 55.38
KRH11368 Soybean extracellular 13.44 55.13
PGSC0003DMT400082049 Potato extracellular, plasma membrane 54.38 54.89
VIT_06s0004g00960.t01 Wine grape extracellular, plasma membrane, vacuole 52.19 54.58
Solyc04g014520.1.1 Tomato plasma membrane 50.31 54.21
AT1G55230.1 Thale cress plasma membrane 50.62 54.0
KRH51013 Soybean extracellular, plasma membrane 52.5 53.85
CDY08230 Canola plasma membrane 47.5 53.15
Solyc01g017600.2.1 Tomato extracellular, plasma membrane, vacuole 51.25 52.56
CDY26121 Canola extracellular, plasma membrane, vacuole 50.94 51.58
KRH02131 Soybean plasma membrane 33.12 51.46
KRH51014 Soybean extracellular, plasma membrane 49.69 51.46
AT5G19870.1 Thale cress plasma membrane 44.38 51.45
PGSC0003DMT400048713 Potato extracellular, plasma membrane, vacuole 50.0 51.12
Bra011903.1-P Field mustard cytosol 36.88 51.08
AT1G55240.1 Thale cress plasma membrane 47.81 49.2
Bra030875.1-P Field mustard extracellular, plasma membrane 47.5 49.19
CDY10579 Canola plasma membrane 44.06 48.79
CDY65755 Canola endoplasmic reticulum, extracellular, plasma membrane 43.75 48.44
CDY10576 Canola endoplasmic reticulum, extracellular, plasma membrane 43.75 48.44
CDY44949 Canola extracellular, plasma membrane 44.38 47.02
Solyc01g006070.2.1 Tomato extracellular, plasma membrane 45.0 46.75
CDY42309 Canola plasma membrane 44.06 46.69
Bra020070.1-P Field mustard extracellular, plasma membrane 44.06 46.69
KRH65232 Soybean plasma membrane 43.44 46.49
CDY65753 Canola plasma membrane 44.06 46.23
KRG90737 Soybean plasma membrane 44.38 45.81
EER98982 Sorghum cytosol, peroxisome, plasma membrane 50.31 45.74
KRH36022 Soybean plasma membrane 43.44 45.72
CDY10580 Canola endoplasmic reticulum, plasma membrane, vacuole 42.5 45.64
OQU84010 Sorghum endoplasmic reticulum, extracellular, plasma membrane 38.75 38.27
OQU80610 Sorghum plasma membrane 35.31 32.66
EES10142 Sorghum extracellular, plasma membrane, plastid 29.06 31.21
EES15542 Sorghum extracellular, plasma membrane 28.12 30.51
KXG29783 Sorghum extracellular, plasma membrane 28.75 30.36
OQU76145 Sorghum extracellular, plasma membrane, plastid 23.44 24.92
Protein Annotations
EnsemblPlants:EER98987EnsemblPlantsGene:SORBI_3002G219200EntrezGene:8062758GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:DUF716_TMEM45PANTHER:PTHR16007PANTHER:PTHR16007:SF27PFAM:PF04819ProteinID:EER98987ProteinID:EER98987.1
RefSeq:XP_002462466.1SEG:segTMHMM:TMhelixUniParc:UPI0001A8411DUniProt:C5XDT1MapMan:35.2
Description
hypothetical protein
Coordinates
chr2:-:61076557..61078022
Molecular Weight (calculated)
35080.8 Da
IEP (calculated)
6.097
GRAVY (calculated)
0.380
Length
320 amino acids
Sequence
(BLAST)
001: MGTLVGHVAP GAGFLLIGLW QLFSHIRLFL LRPSSYSAPV WFPAPGVRHL ELILIIIGAA MSILMELVIG PAKHQPFDDD GTIPSDHLHN FEHASISLAL
101: LVFAAVTIHL DRVKAPLRDA VSQLVAAAAF AQQLLIFHLH SADHMGVEGQ FHWLLQTVIA VTLATTLLGI PYPRSIVVSL VRSASLVLQG VWFVVMGVML
201: WTPALIPKGC FLNLEEGHDV VRCRTDEALD RAKSLVNLQF SWYLTGTVVF VVLFYLQMAK LYPEEPQYLP LVKGGGGGGD DRDSRFSIGD DDHDDEDDVE
301: AAKRGFGHVV SGTKPVEIER
Best Arabidopsis Sequence Match ( AT1G55230.1 )
(BLAST)
001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
Arabidopsis Description
Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.