Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 3
- plasma membrane 3
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G229600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 94.97 | 95.27 |
| TraesCS5A01G231300.1 | Wheat | plasma membrane | 93.08 | 93.67 |
| TraesCS5A01G231100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 92.77 | 93.06 |
| EER98987 | Sorghum | endoplasmic reticulum, plasma membrane | 83.65 | 83.12 |
| Zm00001d020652_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 82.7 | 82.7 |
| HORVU5Hr1G066720.1 | Barley | endoplasmic reticulum | 80.5 | 78.77 |
| Os09t0444900-01 | Rice | peroxisome, plasma membrane | 80.19 | 73.07 |
| EER98986 | Sorghum | endoplasmic reticulum, plasma membrane | 68.24 | 70.45 |
| GSMUA_Achr5P23140_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 61.01 | 62.18 |
| GSMUA_Achr7P18580_001 | Banana | extracellular, plasma membrane, vacuole | 53.14 | 61.9 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 51.89 | 61.57 |
| GSMUA_Achr3P07810_001 | Banana | extracellular, plasma membrane | 59.75 | 61.09 |
| OQU93027 | Sorghum | extracellular | 28.3 | 57.32 |
| VIT_02s0087g00750.t01 | Wine grape | extracellular, plasma membrane | 54.09 | 56.21 |
| KRH11368 | Soybean | extracellular | 13.52 | 55.13 |
| Solyc01g006050.2.1 | Tomato | extracellular, golgi, plasma membrane | 53.77 | 54.11 |
| PGSC0003DMT400082049 | Potato | extracellular, plasma membrane | 53.77 | 53.94 |
| KRH20920 | Soybean | plasma membrane | 52.2 | 53.9 |
| Solyc04g014520.1.1 | Tomato | plasma membrane | 50.0 | 53.54 |
| CDY08230 | Canola | plasma membrane | 48.11 | 53.5 |
| VIT_06s0004g00960.t01 | Wine grape | extracellular, plasma membrane, vacuole | 51.26 | 53.27 |
| Solyc01g017600.2.1 | Tomato | extracellular, plasma membrane, vacuole | 51.89 | 52.88 |
| KRH51013 | Soybean | extracellular, plasma membrane | 51.89 | 52.88 |
| AT1G55230.1 | Thale cress | plasma membrane | 48.74 | 51.67 |
| Bra030875.1-P | Field mustard | extracellular, plasma membrane | 50.0 | 51.46 |
| CDY26121 | Canola | extracellular, plasma membrane, vacuole | 50.94 | 51.27 |
| KRH51014 | Soybean | extracellular, plasma membrane | 49.69 | 51.13 |
| AT5G19870.1 | Thale cress | plasma membrane | 44.34 | 51.09 |
| Bra011903.1-P | Field mustard | cytosol | 37.11 | 51.08 |
| PGSC0003DMT400048713 | Potato | extracellular, plasma membrane, vacuole | 50.0 | 50.8 |
| AT1G55240.1 | Thale cress | plasma membrane | 49.37 | 50.48 |
| CDY10576 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.28 | 49.83 |
| CDY65755 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.28 | 49.83 |
| CDY10579 | Canola | plasma membrane | 45.28 | 49.83 |
| TraesCS5D01G236700.1 | Wheat | plasma membrane | 48.74 | 49.21 |
| KRH02131 | Soybean | plasma membrane | 31.45 | 48.54 |
| CDY10580 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 44.34 | 47.32 |
| CDY65753 | Canola | plasma membrane | 45.28 | 47.21 |
| CDY44949 | Canola | extracellular, plasma membrane | 44.03 | 46.36 |
| KRH65232 | Soybean | plasma membrane | 43.4 | 46.15 |
| Bra020070.1-P | Field mustard | extracellular, plasma membrane | 43.71 | 46.03 |
| CDY42309 | Canola | plasma membrane | 43.71 | 46.03 |
| Solyc01g006070.2.1 | Tomato | extracellular, plasma membrane | 44.03 | 45.45 |
| KRH36022 | Soybean | plasma membrane | 43.08 | 45.07 |
| KRG90737 | Soybean | plasma membrane | 43.08 | 44.19 |
| TraesCS2D01G466300.1 | Wheat | plasma membrane | 27.36 | 29.79 |
| TraesCS2D01G194300.1 | Wheat | plasma membrane | 25.47 | 27.84 |
| TraesCS3D01G457800.1 | Wheat | plasma membrane | 24.84 | 27.15 |
| TraesCS7D01G197200.1 | Wheat | extracellular, plasma membrane | 22.01 | 22.95 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G236600.1 | EnsemblPlantsGene:TraesCS5D01G236600 | InterPro:DUF716_TMEM45 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF27 | PFAM:PF04819 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr5D:+:345034595..345035551
Molecular Weight (calculated)
35200.8 Da
IEP (calculated)
6.458
GRAVY (calculated)
0.272
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTLIGHVAP GAGFLLIGLW QLFNHIRLFV LRPSYYAAPL WFPARGVRHL ELILIIVGTS ASILMELVIG PAKHQPFDDD GTIPSDHLHN FEHASVSLAL
101: LAFAAVTIHM DRVRAPMRDA VSQLAAAAAF AQELLVFHLH STDHMGVEGQ FHWLLQTVIA VTLATTLLGI PYPRSFVVSL VRSASLVLQG VWLIVMGVML
201: WTPGLVSKGC FLNHEDGHDV VQCRTDEALH RAKALVNLQF SWYLTGTMVF VVVLYLQVSR LYPEEPQYLP LVKGRHAGGR FSIGDDREDD DDEEDLEATK
301: RGYGHVVSGG TKPMEVER
101: LAFAAVTIHM DRVRAPMRDA VSQLAAAAAF AQELLVFHLH STDHMGVEGQ FHWLLQTVIA VTLATTLLGI PYPRSFVVSL VRSASLVLQG VWLIVMGVML
201: WTPGLVSKGC FLNHEDGHDV VQCRTDEALH RAKALVNLQF SWYLTGTMVF VVVLYLQVSR LYPEEPQYLP LVKGRHAGGR FSIGDDREDD DDEEDLEATK
301: RGYGHVVSGG TKPMEVER
001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
Arabidopsis Description
Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.