Factsheet for Zm00001d020652_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 3
extracellular 2
vacuole 3
plasma membrane 3
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98987	Sorghum	endoplasmic reticulum, plasma membrane	94.03	93.44
TraesCS5B01G229600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.96	84.23
TraesCS5A01G231100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.02	83.28
TraesCS5D01G236600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	82.7	82.7
TraesCS5A01G231300.1	Wheat	plasma membrane	81.45	81.96
Os09t0444900-01	Rice	peroxisome, plasma membrane	86.16	78.51
HORVU5Hr1G066720.1	Barley	endoplasmic reticulum	77.99	76.31
TraesCS3A01G084100.1	Wheat	plasma membrane	74.53	75.24
GSMUA_Achr7P18580_001	Banana	extracellular, plasma membrane, vacuole	55.35	64.47
GSMUA_Achr5P23140_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	62.89	64.1
GSMUA_Achr3P07810_001	Banana	extracellular, plasma membrane	62.58	63.99
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	53.14	63.06
KRH20920	Soybean	plasma membrane	55.97	57.79
VIT_02s0087g00750.t01	Wine grape	extracellular, plasma membrane	55.03	57.19
Solyc01g006050.2.1	Tomato	extracellular, golgi, plasma membrane	55.35	55.7
VIT_06s0004g00960.t01	Wine grape	extracellular, plasma membrane, vacuole	53.14	55.23
PGSC0003DMT400082049	Potato	extracellular, plasma membrane	55.03	55.2
Zm00001d020651_P001	Maize	plasma membrane	52.83	54.55
KRH51013	Soybean	extracellular, plasma membrane	53.46	54.49
AT1G55230.1	Thale cress	plasma membrane	51.26	54.33
Solyc04g014520.1.1	Tomato	plasma membrane	50.63	54.21
KRH11368	Soybean	extracellular	13.21	53.85
CDY08230	Canola	plasma membrane	47.8	53.15
Solyc01g017600.2.1	Tomato	extracellular, plasma membrane, vacuole	51.57	52.56
CDY26121	Canola	extracellular, plasma membrane, vacuole	51.89	52.22
AT5G19870.1	Thale cress	plasma membrane	45.28	52.17
KRH51014	Soybean	extracellular, plasma membrane	50.63	52.1
KRH02131	Soybean	plasma membrane	33.65	51.94
PGSC0003DMT400048713	Potato	extracellular, plasma membrane, vacuole	50.94	51.76
Bra011903.1-P	Field mustard	cytosol	37.42	51.52
Bra030875.1-P	Field mustard	extracellular, plasma membrane	48.74	50.16
CDY10579	Canola	plasma membrane	45.28	49.83
AT1G55240.1	Thale cress	plasma membrane	48.43	49.52
CDY65755	Canola	endoplasmic reticulum, extracellular, plasma membrane	44.97	49.48
CDY10576	Canola	endoplasmic reticulum, extracellular, plasma membrane	44.97	49.48
Zm00001d035422_P001	Maize	extracellular	28.62	49.19
CDY44949	Canola	extracellular, plasma membrane	45.28	47.68
CDY42309	Canola	plasma membrane	44.97	47.35
Bra020070.1-P	Field mustard	extracellular, plasma membrane	44.97	47.35
CDY65753	Canola	plasma membrane	45.28	47.21
KRH65232	Soybean	plasma membrane	44.03	46.82
Solyc01g006070.2.1	Tomato	extracellular, plasma membrane	45.28	46.75
CDY10580	Canola	endoplasmic reticulum, plasma membrane, vacuole	43.4	46.31
KRG90737	Soybean	plasma membrane	44.03	45.16
KRH36022	Soybean	plasma membrane	43.08	45.07
Zm00001d048662_P001	Maize	plasma membrane	36.16	33.82
Zm00001d036834_P002	Maize	plasma membrane	29.87	32.87
Zm00001d048859_P001	Maize	plasma membrane	26.42	29.68
Zm00001d048804_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	27.36	29.39
Zm00001d037263_P001	Maize	plasma membrane	22.64	23.92

Protein Annotations

EMBL:BT039868	EnsemblPlants:Zm00001d020652_P001	EnsemblPlants:Zm00001d020652_T001	EnsemblPlantsGene:Zm00001d020652	EntrezGene:100272958	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF27	PFAM:PF04819
ProteinID:ONM55334.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00017B7AB0	UniProt:B4FRY0	MapMan:35.2

Description

protein; Plant viral-response family protein-like

Coordinates

chr7:-:126624012..126624968

Molecular Weight (calculated)

34915.4 Da

IEP (calculated)

6.221

GRAVY (calculated)

0.369

Length

318 amino acids

Sequence
(BLAST)

001: MGTLVGHVAP GAGFLLIGLW QLFSHTRLFL LRPSSYSAPV WFPVPGVRHL ELILIIIGTV LSILMELVIG PAKHQPFDDD GTIPSDHLHN FEHASISLAL
101: LVFAAVTIHL DRARAPMRDA VSQLVAAAAF AQQLLIFHLH SADHMGVEGQ FHWLLQTAIA VTLATTLLGI PYPRSFAVSL VRSASLVFQG VWFVVMGVML
201: WTPALIPKGC FLNFEEGHDV VRCRTDDALD RAKSLVNLQF SWYLTGTVVF VVLFYLQMAK LYPEEPQYLP LVKGGGSGSD GRFSIGDDDH DDEDDVEAAK
301: RGGFGHVVSG TRPVEIER

Best Arabidopsis Sequence Match ( AT1G55230.1 )
(BLAST)

001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG

Arabidopsis Description

Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.