Factsheet for Zm00001d020651_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
mitochondrion 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98982	Sorghum	cytosol, peroxisome, plasma membrane	93.18	81.53
TraesCS5B01G229500.1	Wheat	plasma membrane	80.52	78.73
TraesCS5A01G231200.1	Wheat	plasma membrane	79.55	77.78
TraesCS5D01G236700.1	Wheat	plasma membrane	78.9	77.14
HORVU5Hr1G066680.1	Barley	extracellular, plasma membrane	79.22	76.73
Os09t0444800-01	Rice	mitochondrion, plasma membrane, plastid	75.32	73.65
HORVU5Hr1G066700.1	Barley	plastid	48.05	57.36
Zm00001d035422_P001	Maize	extracellular	33.77	56.22
Zm00001d020652_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	54.55	52.83
GSMUA_Achr3P07810_001	Banana	extracellular, plasma membrane	50.97	50.48
KRH11368	Soybean	extracellular	12.66	50.0
GSMUA_Achr5P23140_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	49.68	49.04
GSMUA_Achr7P18580_001	Banana	extracellular, plasma membrane, vacuole	43.18	48.72
VIT_06s0004g00960.t01	Wine grape	extracellular, plasma membrane, vacuole	47.4	47.71
AT5G19870.1	Thale cress	plasma membrane	42.53	47.46
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	41.23	47.39
Solyc04g014520.1.1	Tomato	plasma membrane	44.81	46.46
KRH20920	Soybean	plasma membrane	46.1	46.1
CDY10579	Canola	plasma membrane	41.88	44.64
CDY10576	Canola	endoplasmic reticulum, extracellular, plasma membrane	41.88	44.64
CDY65755	Canola	endoplasmic reticulum, extracellular, plasma membrane	41.88	44.64
KRH51013	Soybean	extracellular, plasma membrane	45.13	44.55
Solyc01g017600.2.1	Tomato	extracellular, plasma membrane, vacuole	44.81	44.23
AT1G55240.1	Thale cress	plasma membrane	44.48	44.05
Bra030875.1-P	Field mustard	extracellular, plasma membrane	44.16	44.01
CDY44949	Canola	extracellular, plasma membrane	42.86	43.71
Bra020070.1-P	Field mustard	extracellular, plasma membrane	42.53	43.38
CDY42309	Canola	plasma membrane	42.53	43.38
KRH51014	Soybean	extracellular, plasma membrane	43.51	43.37
CDY08230	Canola	plasma membrane	39.94	43.01
VIT_02s0087g00750.t01	Wine grape	extracellular, plasma membrane	42.53	42.81
AT1G55230.1	Thale cress	plasma membrane	41.56	42.67
Solyc01g006050.2.1	Tomato	extracellular, golgi, plasma membrane	43.51	42.41
CDY26121	Canola	extracellular, plasma membrane, vacuole	43.51	42.41
CDY65753	Canola	plasma membrane	41.88	42.3
KRH02131	Soybean	plasma membrane	28.25	42.23
PGSC0003DMT400048713	Potato	extracellular, plasma membrane, vacuole	42.86	42.17
PGSC0003DMT400082049	Potato	extracellular, plasma membrane	42.86	41.64
CDY10580	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.26	41.61
Zm00001d048662_P001	Maize	plasma membrane	45.13	40.88
Bra011903.1-P	Field mustard	cytosol	29.87	39.83
KRH36022	Soybean	plasma membrane	39.29	39.8
KRH65232	Soybean	plasma membrane	38.31	39.46
KRG90737	Soybean	plasma membrane	38.96	38.71
Solyc01g006070.2.1	Tomato	extracellular, plasma membrane	38.31	38.31
Zm00001d036834_P002	Maize	plasma membrane	30.84	32.87
Zm00001d048804_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	29.55	30.74
Zm00001d048859_P001	Maize	plasma membrane	28.25	30.74
Zm00001d037263_P001	Maize	plasma membrane	21.43	21.93

Protein Annotations

EMBL:EU954922	EnsemblPlants:Zm00001d020651_P001	EnsemblPlants:Zm00001d020651_T001	EnsemblPlantsGene:Zm00001d020651	EntrezGene:100280959	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF35	PFAM:PF04819
ProteinID:ONM55333.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000182B88C	UniProt:B6SQA7	MapMan:35.2

Description

Plant viral-response family protein

Coordinates

chr7:-:126619286..126620212

Molecular Weight (calculated)

33974.4 Da

IEP (calculated)

7.006

GRAVY (calculated)

0.425

Length

308 amino acids

Sequence
(BLAST)

001: MGGGTPRSSI GHILPGAGFL AVGLWHLFNH IRLFSLRPDA YVAPVWFPAP RVRHLELILV IAGSAVEFSM EMFVDHSTFL PFDADGSIPS DRLHNHEHAI
101: ICLALLVYAA SALHLDRARA RCRDALSLLL VAAVFAQELL VFHFHSTDHA GLEGQFHWLL QLVVAACLAT ALLGIGFPRS FAVSLVRSAC VTFHGVWFMV
201: IGAMVWVPSR VPKGCSLVEE DGRNTVRCHS EASLHRAKAL ANLQFGWYLS SMTVFVVVLY VNVCKWYPAE TAYVRLPPEA GEEEEHLKRK CGIVCSGDHG
301: FTPLEIEV

Best Arabidopsis Sequence Match ( AT1G55240.1 )
(BLAST)

001: MGSFLGHVLP GFAFVALGLW HLFNNIKLFC LHPNTFSSST WFPISKLRHL ELYLIMLSST ASISMELFIG PRRHHPFDVD GTIPSNHLHN FEHSSISMSF
101: LVYAVLALVL DRARPRAAAS EGLTMLAAAA AFSQQLLLFH FHSTDHMGVE GQYHVILQVV IFVSLLTTIM GIFLPKSFLV SLVRSSSIAF QGVWLIVIGC
201: MLYTPSLIPK GCYIHDEGRH IIVKCSTEEA LHRAKSLVNL EFSWLFVTNT LFVVTLYLIL DRVYGENVEY SSLTTNNQTY QDDEEQHFES KSTQKTSFVQ
301: MGKLVGHGQK M

Arabidopsis Description

At1g55240 [Source:UniProtKB/TrEMBL;Acc:Q6NM31]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.