Factsheet for Zm00001d048662_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	extracellular, mitochondrion, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035422_P001	Maize	extracellular	44.12	81.08
KXG29783	Sorghum	extracellular, plasma membrane	47.35	53.14
Zm00001d020651_P001	Maize	plasma membrane	40.88	45.13
Zm00001d020652_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	33.82	36.16
GSMUA_Achr5P23140_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	31.76	34.62
GSMUA_Achr3P07810_001	Banana	extracellular, plasma membrane	30.88	33.76
AT5G19870.1	Thale cress	plasma membrane	27.06	33.33
KRH11368	Soybean	extracellular	7.65	33.33
GSMUA_Achr7P18580_001	Banana	extracellular, plasma membrane, vacuole	26.76	33.33
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	25.88	32.84
VIT_06s0004g00960.t01	Wine grape	extracellular, plasma membrane, vacuole	28.53	31.7
KRH02131	Soybean	plasma membrane	19.12	31.55
CDY42309	Canola	plasma membrane	27.94	31.46
AT1G55240.1	Thale cress	plasma membrane	28.53	31.19
CDY44949	Canola	extracellular, plasma membrane	27.65	31.13
KRH20920	Soybean	plasma membrane	27.94	30.84
Bra020070.1-P	Field mustard	extracellular, plasma membrane	27.35	30.79
Solyc01g017600.2.1	Tomato	extracellular, plasma membrane, vacuole	28.24	30.77
KRH65232	Soybean	plasma membrane	27.06	30.77
KRH51013	Soybean	extracellular, plasma membrane	28.24	30.77
Bra030875.1-P	Field mustard	extracellular, plasma membrane	27.65	30.42
Solyc01g006050.2.1	Tomato	extracellular, golgi, plasma membrane	28.24	30.38
KRH51014	Soybean	extracellular, plasma membrane	27.35	30.1
AT1G55230.1	Thale cress	plasma membrane	26.47	30.0
PGSC0003DMT400082049	Potato	extracellular, plasma membrane	27.94	29.97
Solyc01g006070.2.1	Tomato	extracellular, plasma membrane	27.06	29.87
CDY10576	Canola	endoplasmic reticulum, extracellular, plasma membrane	25.29	29.76
CDY65755	Canola	endoplasmic reticulum, extracellular, plasma membrane	25.29	29.76
VIT_02s0087g00750.t01	Wine grape	extracellular, plasma membrane	26.76	29.74
Solyc04g014520.1.1	Tomato	plasma membrane	25.88	29.63
PGSC0003DMT400048713	Potato	extracellular, plasma membrane, vacuole	27.06	29.39
CDY10580	Canola	endoplasmic reticulum, plasma membrane, vacuole	25.59	29.19
CDY10579	Canola	plasma membrane	24.71	29.07
KRH36022	Soybean	plasma membrane	25.88	28.95
KRG90737	Soybean	plasma membrane	25.88	28.39
CDY08230	Canola	plasma membrane	23.53	27.97
CDY26121	Canola	extracellular, plasma membrane, vacuole	25.88	27.85
Bra011903.1-P	Field mustard	cytosol	18.82	27.71
CDY65753	Canola	plasma membrane	24.71	27.54
Zm00001d048859_P001	Maize	plasma membrane	20.88	25.09
Zm00001d048804_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	20.88	23.99
Zm00001d036834_P002	Maize	plasma membrane	20.0	23.53
Zm00001d037263_P001	Maize	plasma membrane	18.24	20.6

Protein Annotations

EnsemblPlants:Zm00001d048662_P001	EnsemblPlants:Zm00001d048662_T001	EnsemblPlantsGene:Zm00001d048662	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF35	PFAM:PF04819	ProteinID:AQK48356.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000221EFFD	UniProt:K7U8L4	MapMan:35.2	:	:

Description

Plant viral-response family protein

Coordinates

chr4:+:2961499..2962521

Molecular Weight (calculated)

36510.1 Da

IEP (calculated)

6.408

GRAVY (calculated)

0.285

Length

340 amino acids

Sequence
(BLAST)

001: MTMLPRGAAD KIISHTLAGA MLSGLGIWHL FNHMRLLVSL APTAPSSSSS RVAVLAPAAW FPAPRVRRLE PIAMLAAGAY GLATQMLAYS PMPFRADGSI
101: PPERLPNHEH AIIYASLLVY AGSAIYLDDD DDRAGPRHAA PAPTTLCMLL LAALFAQELF VFHVHSSTDD HAGVEARLHW FLQASAAACL AAALLGAARL
201: PADLQLAAGL VRSASLAFQG LWCVVIGVAW VPGMLPAGCY LDGSGVHLRC RGEDSLRHAI AVVNLQFGWC MVLVVGIYVY VCKRYPAGAW SHGEVYGRLP
301: EAEAADEDDD SHHHDMKTPN CKQLAAHDDV HEFTSLEIDV

Best Arabidopsis Sequence Match ( AT1G55240.1 )
(BLAST)

001: MGSFLGHVLP GFAFVALGLW HLFNNIKLFC LHPNTFSSST WFPISKLRHL ELYLIMLSST ASISMELFIG PRRHHPFDVD GTIPSNHLHN FEHSSISMSF
101: LVYAVLALVL DRARPRAAAS EGLTMLAAAA AFSQQLLLFH FHSTDHMGVE GQYHVILQVV IFVSLLTTIM GIFLPKSFLV SLVRSSSIAF QGVWLIVIGC
201: MLYTPSLIPK GCYIHDEGRH IIVKCSTEEA LHRAKSLVNL EFSWLFVTNT LFVVTLYLIL DRVYGENVEY SSLTTNNQTY QDDEEQHFES KSTQKTSFVQ
301: MGKLVGHGQK M

Arabidopsis Description

At1g55240 [Source:UniProtKB/TrEMBL;Acc:Q6NM31]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.