Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 3
- golgi 3
- plasma membrane 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G55240.1 | Thale cress | plasma membrane | 82.89 | 79.42 |
| CDY10576 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 67.11 | 69.2 |
| CDY65755 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 67.11 | 69.2 |
| CDY10579 | Canola | plasma membrane | 66.78 | 68.86 |
| CDY08230 | Canola | plasma membrane | 63.09 | 65.73 |
| CDY65753 | Canola | plasma membrane | 67.11 | 65.57 |
| CDY26121 | Canola | extracellular, plasma membrane, vacuole | 69.46 | 65.51 |
| VIT_02s0087g00750.t01 | Wine grape | extracellular, plasma membrane | 57.38 | 55.88 |
| GSMUA_Achr7P18580_001 | Banana | extracellular, plasma membrane, vacuole | 48.32 | 52.75 |
| VIT_06s0004g00960.t01 | Wine grape | extracellular, plasma membrane, vacuole | 54.03 | 52.61 |
| KRH20920 | Soybean | plasma membrane | 53.69 | 51.95 |
| KRH51013 | Soybean | extracellular, plasma membrane | 54.36 | 51.92 |
| GSMUA_Achr5P23140_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 54.03 | 51.6 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 46.31 | 51.49 |
| KRH51014 | Soybean | extracellular, plasma membrane | 52.68 | 50.81 |
| CDY44949 | Canola | extracellular, plasma membrane | 51.34 | 50.66 |
| CDY42309 | Canola | plasma membrane | 50.67 | 50.0 |
| PGSC0003DMT400082049 | Potato | extracellular, plasma membrane | 52.68 | 49.53 |
| Solyc01g006050.2.1 | Tomato | extracellular, golgi, plasma membrane | 52.35 | 49.37 |
| GSMUA_Achr3P07810_001 | Banana | extracellular, plasma membrane | 50.67 | 48.55 |
| Solyc01g017600.2.1 | Tomato | extracellular, plasma membrane, vacuole | 50.67 | 48.4 |
| KRH36022 | Soybean | plasma membrane | 48.99 | 48.03 |
| PGSC0003DMT400048713 | Potato | extracellular, plasma membrane, vacuole | 50.34 | 47.92 |
| Solyc04g014520.1.1 | Tomato | plasma membrane | 47.65 | 47.81 |
| KRH02131 | Soybean | plasma membrane | 32.55 | 47.09 |
| KRG90737 | Soybean | plasma membrane | 48.66 | 46.77 |
| KRH65232 | Soybean | plasma membrane | 45.97 | 45.82 |
| TraesCS3A01G084100.1 | Wheat | plasma membrane | 47.65 | 45.08 |
| TraesCS5A01G231300.1 | Wheat | plasma membrane | 47.32 | 44.62 |
| TraesCS5B01G229600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 47.32 | 44.48 |
| TraesCS5D01G236600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 47.32 | 44.34 |
| TraesCS5A01G231100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 46.98 | 44.16 |
| Zm00001d020652_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 46.31 | 43.4 |
| HORVU5Hr1G066720.1 | Barley | endoplasmic reticulum | 47.32 | 43.38 |
| Solyc01g006070.2.1 | Tomato | extracellular, plasma membrane | 43.96 | 42.53 |
| EER98987 | Sorghum | endoplasmic reticulum, plasma membrane | 45.64 | 42.5 |
| KRH11368 | Soybean | extracellular | 11.07 | 42.31 |
| Os08t0462800-01 | Rice | extracellular, plasma membrane | 44.63 | 42.22 |
| OQU80608 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 44.63 | 41.82 |
| Os09t0444900-01 | Rice | peroxisome, plasma membrane | 48.66 | 41.55 |
| EER98986 | Sorghum | endoplasmic reticulum, plasma membrane | 41.95 | 40.58 |
| Zm00001d020651_P001 | Maize | plasma membrane | 41.61 | 40.26 |
| TraesCS5A01G231200.1 | Wheat | plasma membrane | 39.26 | 37.14 |
| Zm00001d035422_P001 | Maize | extracellular | 22.82 | 36.76 |
| Os09t0444800-01 | Rice | mitochondrion, plasma membrane, plastid | 38.59 | 36.51 |
| TraesCS5B01G229500.1 | Wheat | plasma membrane | 38.59 | 36.51 |
| EER98982 | Sorghum | cytosol, peroxisome, plasma membrane | 42.95 | 36.36 |
| TraesCS5D01G236700.1 | Wheat | plasma membrane | 38.26 | 36.19 |
| HORVU5Hr1G066680.1 | Barley | extracellular, plasma membrane | 38.59 | 36.16 |
| OQU93027 | Sorghum | extracellular | 18.46 | 35.03 |
| OQU84010 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 34.56 | 31.79 |
| CDY16500 | Canola | plasma membrane | 30.2 | 30.1 |
| CDX77245 | Canola | plasma membrane | 29.53 | 29.43 |
| CDY35545 | Canola | extracellular, plasma membrane | 22.82 | 26.15 |
| CDY29937 | Canola | plasma membrane | 22.82 | 25.76 |
| Zm00001d048662_P001 | Maize | plasma membrane | 29.19 | 25.59 |
| HORVU5Hr1G066700.1 | Barley | plastid | 22.15 | 25.58 |
| KXG29783 | Sorghum | extracellular, plasma membrane | 25.84 | 25.41 |
| CDY37527 | Canola | endoplasmic reticulum, extracellular, plasma membrane, plastid | 16.44 | 15.56 |
| CDY49048 | Canola | plasma membrane | 15.77 | 14.92 |
Protein Annotations
| EnsemblPlants:CDY10580 | EnsemblPlantsGene:GSBRNA2T00032553001 | GO:A0A078F817 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF716_TMEM45 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF27 | PFAM:PF04819 | ProteinID:CDY10580 | ProteinID:CDY10580.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EEB3D2 | UniProt:A0A078F817 | MapMan:35.2 | : |
Description
BnaC03g70340DBnaC03g70340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F817]
Coordinates
chrLK032004:-:581410..583375
Molecular Weight (calculated)
33719.0 Da
IEP (calculated)
6.994
GRAVY (calculated)
0.268
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRAGHVLP GFAFLALGLW HLFNNIKLFC LRPNTFISSP WFPVSKIRHL ELYFMMFSAS ASISMELFIG PRRHHPFDSD GTIPSNHLQN VEHSSISMAF
101: LVYAVSAVVF DRARPRAAAS EGLTILAAAA AFTQQLLLFH FILQLSIFVS LMTTLMGIAL PKSFLVSLVR SSSIAFQGVW LIFLGCMLYT PSLIPKGCFI
201: HDENSHQGVK CSTEEALHRA KSLVCIEFSW LFVINTIFVV TLYMILDRVY GENVEYSSLT SNYQREQYDE EQQHFESEST QKMSFVQMGK FDDHGDKM
101: LVYAVSAVVF DRARPRAAAS EGLTILAAAA AFTQQLLLFH FILQLSIFVS LMTTLMGIAL PKSFLVSLVR SSSIAFQGVW LIFLGCMLYT PSLIPKGCFI
201: HDENSHQGVK CSTEEALHRA KSLVCIEFSW LFVINTIFVV TLYMILDRVY GENVEYSSLT SNYQREQYDE EQQHFESEST QKMSFVQMGK FDDHGDKM
001: MGSFLGHVLP GFAFVALGLW HLFNNIKLFC LHPNTFSSST WFPISKLRHL ELYLIMLSST ASISMELFIG PRRHHPFDVD GTIPSNHLHN FEHSSISMSF
101: LVYAVLALVL DRARPRAAAS EGLTMLAAAA AFSQQLLLFH FHSTDHMGVE GQYHVILQVV IFVSLLTTIM GIFLPKSFLV SLVRSSSIAF QGVWLIVIGC
201: MLYTPSLIPK GCYIHDEGRH IIVKCSTEEA LHRAKSLVNL EFSWLFVTNT LFVVTLYLIL DRVYGENVEY SSLTTNNQTY QDDEEQHFES KSTQKTSFVQ
301: MGKLVGHGQK M
101: LVYAVLALVL DRARPRAAAS EGLTMLAAAA AFSQQLLLFH FHSTDHMGVE GQYHVILQVV IFVSLLTTIM GIFLPKSFLV SLVRSSSIAF QGVWLIVIGC
201: MLYTPSLIPK GCYIHDEGRH IIVKCSTEEA LHRAKSLVNL EFSWLFVTNT LFVVTLYLIL DRVYGENVEY SSLTTNNQTY QDDEEQHFES KSTQKTSFVQ
301: MGKLVGHGQK M
Arabidopsis Description
At1g55240 [Source:UniProtKB/TrEMBL;Acc:Q6NM31]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.