Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 4
- plasma membrane 5
- extracellular 4
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P18580_001 | Banana | extracellular, plasma membrane, vacuole | 69.55 | 79.49 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 67.31 | 78.36 |
| GSMUA_Achr3P07810_001 | Banana | extracellular, plasma membrane | 73.4 | 73.63 |
| CDY08230 | Canola | plasma membrane | 58.01 | 63.29 |
| Zm00001d020652_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 64.1 | 62.89 |
| VIT_02s0087g00750.t01 | Wine grape | extracellular, plasma membrane | 61.54 | 62.75 |
| EER98987 | Sorghum | endoplasmic reticulum, plasma membrane | 64.1 | 62.5 |
| CDY26121 | Canola | extracellular, plasma membrane, vacuole | 63.14 | 62.34 |
| AT1G55230.1 | Thale cress | plasma membrane | 59.94 | 62.33 |
| TraesCS5A01G231300.1 | Wheat | plasma membrane | 62.5 | 61.71 |
| KRH20920 | Soybean | plasma membrane | 60.9 | 61.69 |
| TraesCS5B01G229600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 62.5 | 61.51 |
| TraesCS5D01G236600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 62.18 | 61.01 |
| TraesCS5A01G231100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 61.86 | 60.88 |
| KRH51013 | Soybean | extracellular, plasma membrane | 60.58 | 60.58 |
| TraesCS3A01G084100.1 | Wheat | plasma membrane | 60.58 | 60.0 |
| HORVU5Hr1G066720.1 | Barley | endoplasmic reticulum | 61.86 | 59.38 |
| Bra011903.1-P | Field mustard | cytosol | 43.91 | 59.31 |
| KRH51014 | Soybean | extracellular, plasma membrane | 58.33 | 58.9 |
| Solyc01g006050.2.1 | Tomato | extracellular, golgi, plasma membrane | 59.62 | 58.86 |
| AT1G55240.1 | Thale cress | plasma membrane | 58.65 | 58.84 |
| VIT_06s0004g00960.t01 | Wine grape | extracellular, plasma membrane, vacuole | 57.37 | 58.5 |
| PGSC0003DMT400082049 | Potato | extracellular, plasma membrane | 59.29 | 58.36 |
| Solyc01g017600.2.1 | Tomato | extracellular, plasma membrane, vacuole | 58.01 | 58.01 |
| Os08t0462800-01 | Rice | extracellular, plasma membrane | 58.33 | 57.78 |
| KRH11368 | Soybean | extracellular | 14.42 | 57.69 |
| AT5G19870.1 | Thale cress | plasma membrane | 50.96 | 57.61 |
| Os09t0444900-01 | Rice | peroxisome, plasma membrane | 64.42 | 57.59 |
| Solyc04g014520.1.1 | Tomato | plasma membrane | 54.49 | 57.24 |
| PGSC0003DMT400048713 | Potato | extracellular, plasma membrane, vacuole | 56.73 | 56.55 |
| Bra030875.1-P | Field mustard | extracellular, plasma membrane | 55.45 | 55.99 |
| OQU80608 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 57.05 | 55.97 |
| EER98986 | Sorghum | endoplasmic reticulum, plasma membrane | 55.13 | 55.84 |
| CDY10576 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.64 | 54.67 |
| CDY65755 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.64 | 54.67 |
| KRH02131 | Soybean | plasma membrane | 35.9 | 54.37 |
| CDY44949 | Canola | extracellular, plasma membrane | 52.56 | 54.3 |
| CDY10580 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 51.6 | 54.03 |
| CDY10579 | Canola | plasma membrane | 50.0 | 53.98 |
| Bra020070.1-P | Field mustard | extracellular, plasma membrane | 52.24 | 53.97 |
| CDY42309 | Canola | plasma membrane | 52.24 | 53.97 |
| CDY65753 | Canola | plasma membrane | 50.0 | 51.15 |
| KRH65232 | Soybean | plasma membrane | 48.72 | 50.84 |
| Solyc01g006070.2.1 | Tomato | extracellular, plasma membrane | 49.68 | 50.32 |
| KRH36022 | Soybean | plasma membrane | 48.72 | 50.0 |
| Zm00001d020651_P001 | Maize | plasma membrane | 49.04 | 49.68 |
| KRG90737 | Soybean | plasma membrane | 48.4 | 48.71 |
| Os09t0444800-01 | Rice | mitochondrion, plasma membrane, plastid | 49.04 | 48.57 |
| Zm00001d035422_P001 | Maize | extracellular | 28.53 | 48.11 |
| TraesCS5A01G231200.1 | Wheat | plasma membrane | 47.44 | 46.98 |
| TraesCS5B01G229500.1 | Wheat | plasma membrane | 47.44 | 46.98 |
| HORVU5Hr1G066680.1 | Barley | extracellular, plasma membrane | 47.44 | 46.54 |
| TraesCS5D01G236700.1 | Wheat | plasma membrane | 46.79 | 46.35 |
| OQU93027 | Sorghum | extracellular | 22.12 | 43.95 |
| EER98982 | Sorghum | cytosol, peroxisome, plasma membrane | 48.72 | 43.18 |
| OQU84010 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 39.74 | 38.27 |
| HORVU5Hr1G066700.1 | Barley | plastid | 31.09 | 37.6 |
| GSMUA_Achr7P12360_001 | Banana | plasma membrane | 34.29 | 36.52 |
| Zm00001d048662_P001 | Maize | plasma membrane | 34.62 | 31.76 |
| KXG29783 | Sorghum | extracellular, plasma membrane | 29.49 | 30.36 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 25.96 | 27.0 |
| GSMUA_Achr8P20200_001 | Banana | plasma membrane | 21.79 | 21.73 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P23140_001 | EnsemblPlants:GSMUA_Achr5T23140_001 | EnsemblPlantsGene:GSMUA_Achr5G23140_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF716_TMEM45 | ncoils:Coil | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF27 | PFAM:PF04819 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000296D604 | UniProt:M0T0Y9 | MapMan:35.2 | : | : |
Description
plant viral response family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G23140_001]
Coordinates
chr5:+:24967846..24968784
Molecular Weight (calculated)
35084.8 Da
IEP (calculated)
6.695
GRAVY (calculated)
0.234
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTLVGHVAP GFGFLVIGLW HLFNHIKLYC THPNSYISHP WFCAPKLKHL ELYLIILGSI ASISMELIIG PEAHQPFDAD GTIPSNHLHN FEHASISLSL
101: LIYAWFAIAL DRTRPRPRLH GEMTMLLAAA AFAQQLLMFH LHSADHMGVE GQYHQLLQAV IAVSLATTLL GVALPRSFPV SFVRSASIAF QGVWFVVMGI
201: MLWTPSLIPK GCFMNREEGH RVVRCRSDEA LHRAKSLVNL QFSWYMAATA VFSMLLYLFL SHSYTEEPQY LPLVVNDGAQ EEEEDLESQK TLTESDSFVP
301: MGKGFRPLEL ER
101: LIYAWFAIAL DRTRPRPRLH GEMTMLLAAA AFAQQLLMFH LHSADHMGVE GQYHQLLQAV IAVSLATTLL GVALPRSFPV SFVRSASIAF QGVWFVVMGI
201: MLWTPSLIPK GCFMNREEGH RVVRCRSDEA LHRAKSLVNL QFSWYMAATA VFSMLLYLFL SHSYTEEPQY LPLVVNDGAQ EEEEDLESQK TLTESDSFVP
301: MGKGFRPLEL ER
001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
Arabidopsis Description
Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.