Factsheet for TraesCS5D01G236700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	extracellular, mitochondrion, plasma membrane
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G231200.1	Wheat	plasma membrane	95.56	95.56
TraesCS5B01G229500.1	Wheat	plasma membrane	95.56	95.56
HORVU5Hr1G066680.1	Barley	extracellular, plasma membrane	93.33	92.45
Zm00001d020651_P001	Maize	plasma membrane	77.14	78.9
Os09t0444800-01	Rice	mitochondrion, plasma membrane, plastid	76.19	76.19
HORVU5Hr1G066700.1	Barley	plastid	59.05	72.09
EER98982	Sorghum	cytosol, peroxisome, plasma membrane	76.83	68.75
TraesCS5D01G236600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	49.21	48.74
KRH11368	Soybean	extracellular	12.06	48.72
GSMUA_Achr3P07810_001	Banana	extracellular, plasma membrane	47.62	48.23
GSMUA_Achr7P18580_001	Banana	extracellular, plasma membrane, vacuole	40.63	46.89
GSMUA_Achr5P23140_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	46.35	46.79
AT5G19870.1	Thale cress	plasma membrane	40.95	46.74
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	38.41	45.15
VIT_06s0004g00960.t01	Wine grape	extracellular, plasma membrane, vacuole	43.81	45.1
Solyc01g017600.2.1	Tomato	extracellular, plasma membrane, vacuole	44.44	44.87
KRH20920	Soybean	plasma membrane	43.49	44.48
CDY44949	Canola	extracellular, plasma membrane	42.54	44.37
Solyc04g014520.1.1	Tomato	plasma membrane	41.59	44.11
CDY42309	Canola	plasma membrane	42.22	44.04
Bra020070.1-P	Field mustard	extracellular, plasma membrane	42.22	44.04
PGSC0003DMT400048713	Potato	extracellular, plasma membrane, vacuole	43.49	43.77
CDY65755	Canola	endoplasmic reticulum, extracellular, plasma membrane	39.37	42.91
CDY10579	Canola	plasma membrane	39.37	42.91
CDY10576	Canola	endoplasmic reticulum, extracellular, plasma membrane	39.37	42.91
Bra030875.1-P	Field mustard	extracellular, plasma membrane	41.9	42.72
VIT_02s0087g00750.t01	Wine grape	extracellular, plasma membrane	41.27	42.48
KRH51013	Soybean	extracellular, plasma membrane	41.59	41.99
AT1G55240.1	Thale cress	plasma membrane	41.27	41.8
KRH51014	Soybean	extracellular, plasma membrane	40.95	41.75
Solyc01g006050.2.1	Tomato	extracellular, golgi, plasma membrane	41.59	41.46
CDY65753	Canola	plasma membrane	39.37	40.66
AT1G55230.1	Thale cress	plasma membrane	38.41	40.33
CDY08230	Canola	plasma membrane	36.51	40.21
PGSC0003DMT400082049	Potato	extracellular, plasma membrane	40.32	40.06
CDY26121	Canola	extracellular, plasma membrane, vacuole	39.68	39.56
KRH02131	Soybean	plasma membrane	25.71	39.32
Solyc01g006070.2.1	Tomato	extracellular, plasma membrane	37.78	38.64
KRH36022	Soybean	plasma membrane	37.14	38.49
CDY10580	Canola	endoplasmic reticulum, plasma membrane, vacuole	36.19	38.26
KRH65232	Soybean	plasma membrane	36.19	38.13
Bra011903.1-P	Field mustard	cytosol	27.3	37.23
KRG90737	Soybean	plasma membrane	36.51	37.1
TraesCS3D01G457800.1	Wheat	plasma membrane	26.35	28.52
TraesCS2D01G466300.1	Wheat	plasma membrane	25.08	27.05
TraesCS2D01G194300.1	Wheat	plasma membrane	24.76	26.8
TraesCS7D01G197200.1	Wheat	extracellular, plasma membrane	18.73	19.34

Protein Annotations

EnsemblPlants:TraesCS5D01G236700.1	EnsemblPlantsGene:TraesCS5D01G236700	InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF35	PFAM:PF04819
TMHMM:TMhelix	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:345082965..345083912

Molecular Weight (calculated)

34722.3 Da

IEP (calculated)

7.651

GRAVY (calculated)

0.332

Length

315 amino acids

Sequence
(BLAST)

001: MGGTPRSSIG HILPGAGFFT VGLWHLFNHI RLFSQRPDSY VAPVWFPVPR ARYLEPALVI AGSALEFVME MFVDHSTFLP FDADGSIPSD RLHNHEHAII
101: CLALIVYAGG AVHLDRARAP GRRALCLLLV SVVFAQELLV FHFHSTDHAG VEGQFHWILQ VVVAACLGTA LLGVGFPRSF AVSLARSACI MFHGVWLAVI
201: GAMVWVPSMV PKGCSLVRED GRDTVRCHSK ASLHRARALV NLQFGWYLSF MTVLVLAVYL YVCSKYPADQ PYARLLRKAG DEEEEHDLEA RKCGVPRDGG
301: SDVHARGFAP LEIQV

Best Arabidopsis Sequence Match ( AT1G49470.1 )
(BLAST)

001: MGTFLGHFVP GLSLALLGLW HLFNTIRSYC LKGPEAFSAK FWFPFPKLKH LELILILFFS FLSITLLTLD FPNFNFSSLK PDNLEHASMF LHLIIFACFA
101: LFCELTLCSD LFSGLIGVLS ASVFAQELFL LHFHSTDHSG LEGHYHFLLQ LIAFVSFSSA LASASFPKSF SAALFLPISV MFQGCWFLNM GFMLWIPEYV
201: PRGCVSNMST STDNNRRSVY HSGAVACESP GAEIRAKALA NLQFSWMLSA ILIITCALCL KYSGKVVLPK IRSSLEYERL CRQGSDRSAT VTVEAPASSD
301: QQ

Arabidopsis Description

At1g49470 [Source:UniProtKB/TrEMBL;Acc:Q9XIB3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.