Factsheet for TraesCS3D01G457800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G507100.1	Wheat	plasma membrane	96.22	96.22
TraesCS3A01G463700.1	Wheat	plasma membrane	95.88	94.58
HORVU3Hr1G099300.14	Barley	extracellular	91.07	86.89
TraesCS2D01G194300.1	Wheat	plasma membrane	85.57	85.57
Os11t0621000-01	Rice	extracellular, plasma membrane	79.73	75.08
TraesCS2D01G466300.1	Wheat	plasma membrane	63.92	63.7
KRH76363	Soybean	extracellular, plasma membrane	58.76	61.51
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	62.89	61.0
KRH39651	Soybean	plasma membrane	57.04	59.71
CDY35545	Canola	extracellular, plasma membrane	52.23	58.46
CDY29937	Canola	plasma membrane	52.92	58.33
VIT_06s0009g01520.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	24.05	58.33
AT1G32127.1	Thale cress	plasma membrane	52.58	57.95
Bra033853.1-P	Field mustard	extracellular, plasma membrane	52.23	57.58
KRH07683	Soybean	extracellular	53.26	57.2
VIT_02s0033g00010.t01	Wine grape	extracellular, plasma membrane	30.93	56.25
PGSC0003DMT400079341	Potato	extracellular, plasma membrane	52.58	55.84
VIT_03s0063g02210.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, mitochondrion	17.18	55.56
Solyc08g075970.2.1	Tomato	extracellular, plasma membrane	52.23	55.47
VIT_02s0033g00020.t01	Wine grape	endoplasmic reticulum, extracellular	18.56	51.92
TraesCS5D01G236700.1	Wheat	plasma membrane	28.52	26.35
TraesCS5D01G236600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	27.15	24.84
TraesCS7D01G197200.1	Wheat	extracellular, plasma membrane	20.96	20.0

Protein Annotations

EnsemblPlants:TraesCS3D01G457800.1	EnsemblPlantsGene:TraesCS3D01G457800	InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF43	PFAM:PF04819
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3D:+:563425132..563428046

Molecular Weight (calculated)

31093.7 Da

IEP (calculated)

5.944

GRAVY (calculated)

0.556

Length

291 amino acids

Sequence
(BLAST)

001: MGSFKGHVLP GTLFLAVGAW HVWAAVARFA MDPAGFRLRV WNPVGAGGGA LRHLELYVIA GGAFLDMCVE VLYSTHLHIF APGGGVNPAH LNDLEHGGML
101: LMFFLVGALA LLSENTRYLP LTEGALCLLA ATAYTAELLL FYFHSTTHQG LEGYYHYLLV VLVGLCVASA VLGALLPASF PADLASGLLI TLQGLWFYQT
201: AFTLYGPMLP EGCHRDAGGD IDCHGHAAGE RAEQLADFQL FAYVFLVFAY ALGCYAVAAA RYGHPDLRAV EMEEHRENGG FVGSSALASG I

Best Arabidopsis Sequence Match ( AT1G32127.2 )
(BLAST)

001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR

Arabidopsis Description

Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.