Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G101400.1 | Wheat | plasma membrane | 95.41 | 95.41 |
| TraesCS7A01G195700.1 | Wheat | plasma membrane | 94.75 | 94.75 |
| HORVU7Hr1G039900.1 | Barley | extracellular, mitochondrion, plastid | 93.11 | 83.78 |
| OQU76145 | Sorghum | extracellular, plasma membrane, plastid | 79.34 | 80.4 |
| Zm00001d037263_P001 | Maize | plasma membrane | 78.36 | 79.4 |
| Os06t0238900-01 | Rice | extracellular, plasma membrane | 77.38 | 76.38 |
| GSMUA_Achr8P20200_001 | Banana | plasma membrane | 48.52 | 47.28 |
| CDY49048 | Canola | plasma membrane | 36.39 | 35.24 |
| CDY37527 | Canola | endoplasmic reticulum, extracellular, plasma membrane, plastid | 35.74 | 34.6 |
| Bra039124.1-P | Field mustard | plasma membrane | 35.41 | 34.29 |
| VIT_14s0066g01930.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 35.74 | 34.28 |
| Solyc02g087260.1.1 | Tomato | plasma membrane | 37.38 | 33.93 |
| AT3G01360.1 | Thale cress | extracellular, plasma membrane, plastid | 35.08 | 33.54 |
| PGSC0003DMT400003263 | Potato | plasma membrane | 36.72 | 33.33 |
| TraesCS5D01G236600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 22.95 | 22.01 |
| TraesCS3D01G457800.1 | Wheat | plasma membrane | 20.0 | 20.96 |
| TraesCS2D01G194300.1 | Wheat | plasma membrane | 19.67 | 20.62 |
| TraesCS2D01G466300.1 | Wheat | plasma membrane | 19.02 | 19.86 |
| TraesCS5D01G236700.1 | Wheat | plasma membrane | 19.34 | 18.73 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G197200.1 | EnsemblPlantsGene:TraesCS7D01G197200 | InterPro:DUF716_TMEM45 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF9 | PFAM:PF04819 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7D:-:153765501..153769430
Molecular Weight (calculated)
32253.3 Da
IEP (calculated)
7.395
GRAVY (calculated)
0.270
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGLLAYSGA GLGLLALAAL EALQPRLPRL PLLPRRLSAP PHHRGLLAAL LSALCLLSAL LSAHHLALPT LAASALFLLH SLAPFAFAPL AAPPPPPLLD
101: LLLAAAFGQE LLLFAHRRPS TAAGIENRYF DLFLVPVAVC LGATLLAAHR PGAAPPRLAR AAGLALQGTW MLQMGFSFFT DAIAAGCALH AQSRADYTIK
201: CRTHEDYHRA RSVATLQFNG HLALLVLAGA ATYATVIARG NGSPPSGYRM LDKEVQMEGM PLTSQFTLDS DEEKEDEGIT TAEPQVANGV NSHQQISVQT
301: PDDPK
101: LLLAAAFGQE LLLFAHRRPS TAAGIENRYF DLFLVPVAVC LGATLLAAHR PGAAPPRLAR AAGLALQGTW MLQMGFSFFT DAIAAGCALH AQSRADYTIK
201: CRTHEDYHRA RSVATLQFNG HLALLVLAGA ATYATVIARG NGSPPSGYRM LDKEVQMEGM PLTSQFTLDS DEEKEDEGIT TAEPQVANGV NSHQQISVQT
301: PDDPK
001: MGILSYAVAG GGFAVIGAWE SLDSSNLDPN SSSGTADSSS PMAQIRASPP KSVGSSSIPV ALLSSLFIAN SFFSFFSSIG SRDRVGSMIQ LQIVAVAVLF
101: LYYAILTYLV NSKNAVFVAL PSSITTLLLL FGFIEEFLMF YLQKKDVSGI ENRYYDLMLV PIAICVFSTV FELKSDSSTH RFAKLGRGIG LILQGTWFLQ
201: MGVSFFTGLI TNNCTFHEKS RGNFTIKCKG HGDYHRAKAI ATLQFNCHLA LMVVVATGLF SVIANKNGYL RQDHSKYRPL GAELENLSTF TLDSDEEDEV
301: REESNVAKEV GLNGNSSHD
101: LYYAILTYLV NSKNAVFVAL PSSITTLLLL FGFIEEFLMF YLQKKDVSGI ENRYYDLMLV PIAICVFSTV FELKSDSSTH RFAKLGRGIG LILQGTWFLQ
201: MGVSFFTGLI TNNCTFHEKS RGNFTIKCKG HGDYHRAKAI ATLQFNCHLA LMVVVATGLF SVIANKNGYL RQDHSKYRPL GAELENLSTF TLDSDEEDEV
301: REESNVAKEV GLNGNSSHD
Arabidopsis Description
At3g01360 [Source:UniProtKB/TrEMBL;Acc:Q9SRI3]
SUBAcon: [plasma membrane,plastid,extracellular]
SUBAcon: [plasma membrane,plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.