Factsheet for VIT_14s0066g01930.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003263	Potato	plasma membrane	55.97	52.98
Solyc02g087260.1.1	Tomato	plasma membrane	55.66	52.68
CDY37527	Canola	endoplasmic reticulum, extracellular, plasma membrane, plastid	51.89	52.38
Bra039124.1-P	Field mustard	plasma membrane	51.57	52.06
CDY49048	Canola	plasma membrane	50.94	51.43
AT3G01360.1	Thale cress	extracellular, plasma membrane, plastid	50.31	50.16
GSMUA_Achr8P20200_001	Banana	plasma membrane	42.45	43.13
OQU76145	Sorghum	extracellular, plasma membrane, plastid	35.22	37.21
Os06t0238900-01	Rice	extracellular, plasma membrane	35.85	36.89
Zm00001d037263_P001	Maize	plasma membrane	34.91	36.88
TraesCS7B01G101400.1	Wheat	plasma membrane	34.59	36.07
TraesCS7D01G197200.1	Wheat	extracellular, plasma membrane	34.28	35.74
TraesCS7A01G195700.1	Wheat	plasma membrane	33.96	35.41
HORVU7Hr1G039900.1	Barley	extracellular, mitochondrion, plastid	33.96	31.86
VIT_02s0033g00020.t01	Wine grape	endoplasmic reticulum, extracellular	8.49	25.96
VIT_06s0004g00960.t01	Wine grape	extracellular, plasma membrane, vacuole	19.18	19.93
VIT_02s0087g00750.t01	Wine grape	extracellular, plasma membrane	18.87	19.61
VIT_02s0033g00010.t01	Wine grape	extracellular, plasma membrane	7.23	14.38
VIT_06s0009g01520.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	5.03	13.33
VIT_03s0063g01730.t01	Wine grape	mitochondrion	14.47	12.33
VIT_03s0063g02210.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, mitochondrion	2.83	10.0

Protein Annotations

EntrezGene:100262740	wikigene:100262740	MapMan:35.2	EMBL:AM484747	ProteinID:CAN73131	ProteinID:CAN73131.1
ProteinID:CCB58551	ProteinID:CCB58551.1	InterPro:DUF716_TMEM45	UniProt:F6HV33	EMBL:FN596252	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100262740	wikigene:LOC100262740	PFAM:PF04819	PANTHER:PTHR16007
PANTHER:PTHR16007:SF9	TMHMM:TMhelix	UniParc:UPI0001984CC3	ArrayExpress:VIT_14s0066g01930	EnsemblPlantsGene:VIT_14s0066g01930	EnsemblPlants:VIT_14s0066g01930.t01
unigene:Vvi.22203	RefSeq:XP_002280785	RefSeq:XP_002280785.1	RefSeq:XP_010660975.1	RefSeq:XP_010660976.1	SEG:seg

Description

No Description!

Coordinates

chr14:+:28219037..28220259

Molecular Weight (calculated)

35293.0 Da

IEP (calculated)

8.213

GRAVY (calculated)

0.265

Length

318 amino acids

Sequence
(BLAST)

001: MGFFTLVLAG VGFILIGMWE SLLSSSQTPK LDQSSITPGT RPGRKYPYSS PLTFFSIALL SFFFICNSLY SLIDAVNSKD RVGSPLQLQV LATAFLFLLY
101: AVLGLLMKFT DSIPLPSSFL SLICLFAFAE EFLLFYLQRK DTVGIENRYF DMMLVPITIC LFSTVLELKS PKSNLPRLAR GIGLILHGTW FLQMGISFFS
201: SWMVHGCSLY EKSRGNYTVR CKGHPEYHRG RAIATLQFNF HLAFLVVLVV AAFSIISRRN GGQGGSEQYR PIGAETHSLD LTGQFSLASD DDEIKGEESM
301: EKQKPAAIEM GANGHGSH

Best Arabidopsis Sequence Match ( AT3G01360.2 )
(BLAST)

001: MGILSYAVAG GGFAVIGAWE SLDSSNLDPN SSSGTADSSS PMAQIRASPP KSVGSSSIPV ALLSSLFIAN SFFSFFSSIG SRDRVGSMIQ LQIVAVAVLF
101: LYYAILTYLV NSKNAVFVAL PSSITTLLLL FGFIEEFLMF YLQKKDVSGI ENRYYDLMLV PIAICVFSTV FELKSDSSTH RFAKLGRGIG LILQGTWFLQ
201: MGVSFFTGLI TNNCTFHEKS RGNFTIKCKG HGDYHRAKAI ATLQFNCHLA LMVVVATGLF SVIANKNGYL RQDHSKYRPL GAELENLSTF TLDSDEEDEV
301: REESNVAKEV GLNGNSSHD

Arabidopsis Description

At3g01360 [Source:UniProtKB/TrEMBL;Acc:Q9SRI3]
SUBAcon: [plasma membrane,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.