Factsheet for VIT_06s0004g00960.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0087g00750.t01	Wine grape	extracellular, plasma membrane	71.57	71.57
KRH11368	Soybean	extracellular	16.99	66.67
KRH20920	Soybean	plasma membrane	65.36	64.94
KRH51013	Soybean	extracellular, plasma membrane	63.07	61.86
Solyc01g006050.2.1	Tomato	extracellular, golgi, plasma membrane	62.09	60.13
KRH51014	Soybean	extracellular, plasma membrane	60.13	59.55
GSMUA_Achr7P18580_001	Banana	extracellular, plasma membrane, vacuole	52.94	59.34
CDY08230	Canola	plasma membrane	55.23	59.09
AT1G55230.1	Thale cress	plasma membrane	57.84	59.0
PGSC0003DMT400082049	Potato	extracellular, plasma membrane	61.11	58.99
Solyc01g017600.2.1	Tomato	extracellular, plasma membrane, vacuole	59.48	58.33
Solyc04g014520.1.1	Tomato	plasma membrane	56.54	58.25
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	50.65	57.84
KRH02131	Soybean	plasma membrane	38.89	57.77
AT5G19870.1	Thale cress	plasma membrane	51.96	57.61
CDY26121	Canola	extracellular, plasma membrane, vacuole	59.48	57.59
GSMUA_Achr5P23140_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	58.5	57.37
GSMUA_Achr3P07810_001	Banana	extracellular, plasma membrane	57.84	56.91
PGSC0003DMT400048713	Potato	extracellular, plasma membrane, vacuole	57.84	56.55
Bra011903.1-P	Field mustard	cytosol	42.48	56.28
KRH36022	Soybean	plasma membrane	55.88	56.25
KRH65232	Soybean	plasma membrane	53.92	55.18
AT1G55240.1	Thale cress	plasma membrane	55.88	54.98
KRG90737	Soybean	plasma membrane	55.56	54.84
CDY10580	Canola	endoplasmic reticulum, plasma membrane, vacuole	52.61	54.03
Bra030875.1-P	Field mustard	extracellular, plasma membrane	54.25	53.72
CDY42309	Canola	plasma membrane	52.94	53.64
CDY44949	Canola	extracellular, plasma membrane	52.94	53.64
Bra020070.1-P	Field mustard	extracellular, plasma membrane	52.61	53.31
CDY10576	Canola	endoplasmic reticulum, extracellular, plasma membrane	50.33	53.29
CDY65755	Canola	endoplasmic reticulum, extracellular, plasma membrane	50.33	53.29
Zm00001d020652_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	55.23	53.14
CDY10579	Canola	plasma membrane	50.0	52.94
Solyc01g006070.2.1	Tomato	extracellular, plasma membrane	52.94	52.6
EER98987	Sorghum	endoplasmic reticulum, plasma membrane	54.58	52.19
TraesCS5A01G231100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	53.92	52.05
TraesCS5A01G231300.1	Wheat	plasma membrane	53.27	51.58
TraesCS5B01G229600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	53.27	51.42
TraesCS5D01G236600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	53.27	51.26
CDY65753	Canola	plasma membrane	50.0	50.16
TraesCS3A01G084100.1	Wheat	plasma membrane	51.63	50.16
Os08t0462800-01	Rice	extracellular, plasma membrane	51.31	49.84
OQU80608	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	51.63	49.69
Os09t0444900-01	Rice	peroxisome, plasma membrane	56.21	49.28
HORVU5Hr1G066720.1	Barley	endoplasmic reticulum	52.29	49.23
EER98986	Sorghum	endoplasmic reticulum, plasma membrane	49.02	48.7
Zm00001d020651_P001	Maize	plasma membrane	47.71	47.4
TraesCS5B01G229500.1	Wheat	plasma membrane	45.42	44.13
TraesCS5A01G231200.1	Wheat	plasma membrane	45.1	43.81
TraesCS5D01G236700.1	Wheat	plasma membrane	45.1	43.81
HORVU5Hr1G066680.1	Barley	extracellular, plasma membrane	45.1	43.4
Os09t0444800-01	Rice	mitochondrion, plasma membrane, plastid	44.12	42.86
Zm00001d035422_P001	Maize	extracellular	24.84	41.08
OQU93027	Sorghum	extracellular	20.91	40.76
EER98982	Sorghum	cytosol, peroxisome, plasma membrane	45.75	39.77
OQU84010	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	37.25	35.19
HORVU5Hr1G066700.1	Barley	plastid	27.78	32.95
VIT_06s0009g01520.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	11.44	29.17
KXG29783	Sorghum	extracellular, plasma membrane	28.43	28.71
Zm00001d048662_P001	Maize	plasma membrane	31.7	28.53
VIT_02s0033g00010.t01	Wine grape	extracellular, plasma membrane	14.38	27.5
VIT_03s0063g01730.t01	Wine grape	mitochondrion	32.03	26.27
VIT_02s0033g00020.t01	Wine grape	endoplasmic reticulum, extracellular	8.82	25.96
VIT_03s0063g02210.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, mitochondrion	7.52	25.56
VIT_14s0066g01930.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	19.93	19.18

Protein Annotations

EntrezGene:100255325	wikigene:100255325	MapMan:35.2	ProteinID:CCB43787	ProteinID:CCB43787.1	InterPro:DUF716_TMEM45
UniProt:F6GUJ2	EMBL:FN594951	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100255325
wikigene:LOC100255325	PFAM:PF04819	PANTHER:PTHR16007	PANTHER:PTHR16007:SF27	TIGR:TC54850	TIGR:TC56896
TMHMM:TMhelix	UniParc:UPI0001983772	ArrayExpress:VIT_06s0004g00960	EnsemblPlantsGene:VIT_06s0004g00960	EnsemblPlants:VIT_06s0004g00960.t01	unigene:Vvi.7407
RefSeq:XP_002285686	RefSeq:XP_002285686.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:-:1076639..1077994

Molecular Weight (calculated)

34679.7 Da

IEP (calculated)

7.058

GRAVY (calculated)

0.325

Length

306 amino acids

Sequence
(BLAST)

001: MGSLVGHVLP GLGFFLIGLW HLFNHIKLHA QNPHSYTSHP WFPTSKIRYL ELFLIMIGCS ISISMELFIG PVRHQPFDVD GTIPSNHLHN FEHSSISMTF
101: LVYAASAIAL DRAGVKARND LSLLLAGIAF GQQLLLFHLH STDHVGMEGQ YHMLLQILIS LSLTSTLMGI GLPKSFILSF VRSISILFQG LWLMVMGVML
201: WTPAYIPKGC FLRWEEGHQV AHCHDDKSLH RAKALINIEF SWYVIGMAMF SVFFYLFLVK VYGEKVKYWS LGKEEEEEEG EALSPEKTKL GFIHMGQAFA
301: PMDIER

Best Arabidopsis Sequence Match ( AT1G55230.1 )
(BLAST)

001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG

Arabidopsis Description

Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.