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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • mitochondrion 2
  • plastid 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:extracellular
Plant-mPloc:mitochondrion, plastid
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU80608 Sorghum endoplasmic reticulum, extracellular, plasma membrane 79.05 78.3
Os09t0444900-01 Rice peroxisome, plasma membrane 70.16 63.32
GSMUA_Achr3P07810_001 Banana extracellular, plasma membrane 57.78 58.52
GSMUA_Achr5P23140_001 Banana endoplasmic reticulum, extracellular, plasma membrane 57.78 58.33
GSMUA_Achr10P... Banana extracellular, plasma membrane 49.21 57.84
KRH11368 Soybean extracellular 14.29 57.69
GSMUA_Achr7P18580_001 Banana extracellular, plasma membrane, vacuole 48.25 55.68
KRH20920 Soybean plasma membrane 53.02 54.22
VIT_02s0087g00750.t01 Wine grape extracellular, plasma membrane 52.06 53.59
Os09t0444800-01 Rice mitochondrion, plasma membrane, plastid 52.7 52.7
CDY08230 Canola plasma membrane 46.98 51.75
AT1G55230.1 Thale cress plasma membrane 49.21 51.67
KRH51013 Soybean extracellular, plasma membrane 51.11 51.6
AT5G19870.1 Thale cress plasma membrane 45.08 51.45
VIT_06s0004g00960.t01 Wine grape extracellular, plasma membrane, vacuole 49.84 51.31
CDY26121 Canola extracellular, plasma membrane, vacuole 51.11 50.95
KRH51014 Soybean extracellular, plasma membrane 49.84 50.81
Bra030875.1-P Field mustard extracellular, plasma membrane 49.21 50.16
CDY10579 Canola plasma membrane 45.71 49.83
Solyc01g006050.2.1 Tomato extracellular, golgi, plasma membrane 49.84 49.68
PGSC0003DMT400082049 Potato extracellular, plasma membrane 49.84 49.53
Solyc04g014520.1.1 Tomato plasma membrane 46.67 49.49
CDY65755 Canola endoplasmic reticulum, extracellular, plasma membrane 45.4 49.48
CDY10576 Canola endoplasmic reticulum, extracellular, plasma membrane 45.4 49.48
Bra011903.1-P Field mustard cytosol 36.19 49.35
KRH02131 Soybean plasma membrane 31.43 48.06
CDY44949 Canola extracellular, plasma membrane 45.4 47.35
CDY65753 Canola plasma membrane 45.71 47.21
CDY42309 Canola plasma membrane 45.08 47.02
Bra020070.1-P Field mustard extracellular, plasma membrane 45.08 47.02
Solyc01g017600.2.1 Tomato extracellular, plasma membrane, vacuole 46.35 46.79
AT1G55240.1 Thale cress plasma membrane 46.03 46.62
PGSC0003DMT400048713 Potato extracellular, plasma membrane, vacuole 45.08 45.37
CDY10580 Canola endoplasmic reticulum, plasma membrane, vacuole 42.22 44.63
KRH65232 Soybean plasma membrane 40.95 43.14
KRH36022 Soybean plasma membrane 39.68 41.12
Solyc01g006070.2.1 Tomato extracellular, plasma membrane 40.0 40.91
KRG90737 Soybean plasma membrane 39.05 39.68
Os08t0462900-01 Rice extracellular, plasma membrane 35.56 36.36
Os11t0621000-01 Rice extracellular, plasma membrane 27.3 27.83
Os06t0238900-01 Rice extracellular, plasma membrane 22.54 22.98
Protein Annotations
EMBL:AK108845EnsemblPlants:Os08t0462800-01EnsemblPlantsGene:Os08g0462800EntrezGene:4345774GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:DUF716_TMEM45PANTHER:PTHR16007PANTHER:PTHR16007:SF27PFAM:PF04819ProteinID:BAD10307.1
ProteinID:BAD10683.1ProteinID:BAF23901.1ProteinID:BAT05779.1RefSeq:XP_015649519.1SEG:segTMHMM:TMhelix
UniParc:UPI000023B06FUniProt:Q6YUB7MapMan:35.2:::
Description
Protein of unknown function DUF716 family protein. (Os08t0462800-01)
Coordinates
chr8:-:22711339..22712603
Molecular Weight (calculated)
33800.1 Da
IEP (calculated)
6.506
GRAVY (calculated)
0.390
Length
315 amino acids
Sequence
(BLAST)
001: MGTLVGHVAP GAGFLLVGLW HLYNHIRLFL LRPTAYVAPV WFPVRRARYL ELALVIAGAV ASILMELVVG PARHQPFDAD GTVPSDHLHN FEHASISLAL
101: LVYAAAAAAL DVARVPHGRA VSQLVAAVAF AQQLMLFHLH SADHAGVEGQ YHLLLQGVVA VTLAATVLGV AAPRSFAVSL VRSASLVLQG VWFLAMGVMM
201: WTPALLPKGC FLSREDGHDV ARCRADDGGD ALARAKALVN LEFSWYLSGT VVLVVALYLR LCRLYPEEPR YMPLVRGDCR DDDEDGGGDG DDNDVEAGKG
301: GAGHVLREPL EIARP
Best Arabidopsis Sequence Match ( AT1G55230.1 )
(BLAST)
001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
Arabidopsis Description
Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.