Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44949 | Canola | extracellular, plasma membrane | 99.01 | 99.01 |
| Bra020070.1-P | Field mustard | extracellular, plasma membrane | 98.34 | 98.34 |
| AT5G19870.1 | Thale cress | plasma membrane | 83.77 | 91.67 |
| CDY26121 | Canola | extracellular, plasma membrane, vacuole | 60.6 | 57.91 |
| CDY08230 | Canola | plasma membrane | 53.31 | 56.29 |
| VIT_02s0087g00750.t01 | Wine grape | extracellular, plasma membrane | 56.62 | 55.88 |
| KRH20920 | Soybean | plasma membrane | 56.62 | 55.52 |
| KRH51013 | Soybean | extracellular, plasma membrane | 56.95 | 55.13 |
| KRH02131 | Soybean | plasma membrane | 36.76 | 53.88 |
| Solyc04g014520.1.1 | Tomato | plasma membrane | 52.98 | 53.87 |
| KRH51014 | Soybean | extracellular, plasma membrane | 54.97 | 53.72 |
| Solyc01g006050.2.1 | Tomato | extracellular, golgi, plasma membrane | 55.96 | 53.48 |
| PGSC0003DMT400082049 | Potato | extracellular, plasma membrane | 55.63 | 53.0 |
| VIT_06s0004g00960.t01 | Wine grape | extracellular, plasma membrane, vacuole | 53.64 | 52.94 |
| GSMUA_Achr7P18580_001 | Banana | extracellular, plasma membrane, vacuole | 47.35 | 52.38 |
| GSMUA_Achr5P23140_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 53.97 | 52.24 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 46.36 | 52.24 |
| CDY65755 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 49.01 | 51.21 |
| CDY10576 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 49.01 | 51.21 |
| Solyc01g017600.2.1 | Tomato | extracellular, plasma membrane, vacuole | 52.65 | 50.96 |
| CDY10579 | Canola | plasma membrane | 48.68 | 50.87 |
| CDY10580 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 50.0 | 50.67 |
| KRH36022 | Soybean | plasma membrane | 50.99 | 50.66 |
| PGSC0003DMT400048713 | Potato | extracellular, plasma membrane, vacuole | 52.32 | 50.48 |
| KRH65232 | Soybean | plasma membrane | 49.67 | 50.17 |
| GSMUA_Achr3P07810_001 | Banana | extracellular, plasma membrane | 51.32 | 49.84 |
| KRG90737 | Soybean | plasma membrane | 50.99 | 49.68 |
| CDY65753 | Canola | plasma membrane | 48.68 | 48.2 |
| KRH11368 | Soybean | extracellular | 12.25 | 47.44 |
| Solyc01g006070.2.1 | Tomato | extracellular, plasma membrane | 46.36 | 45.45 |
| TraesCS5A01G231300.1 | Wheat | plasma membrane | 47.35 | 45.25 |
| TraesCS5B01G229600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 47.35 | 45.11 |
| TraesCS5A01G231100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 47.35 | 45.11 |
| Os08t0462800-01 | Rice | extracellular, plasma membrane | 47.02 | 45.08 |
| Zm00001d020652_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 47.35 | 44.97 |
| HORVU5Hr1G066720.1 | Barley | endoplasmic reticulum | 48.34 | 44.92 |
| EER98986 | Sorghum | endoplasmic reticulum, plasma membrane | 45.7 | 44.81 |
| EER98987 | Sorghum | endoplasmic reticulum, plasma membrane | 46.69 | 44.06 |
| OQU80608 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 46.36 | 44.03 |
| TraesCS5D01G236600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 46.03 | 43.71 |
| TraesCS3A01G084100.1 | Wheat | plasma membrane | 45.03 | 43.17 |
| Zm00001d020651_P001 | Maize | plasma membrane | 43.38 | 42.53 |
| TraesCS5A01G231200.1 | Wheat | plasma membrane | 44.04 | 42.22 |
| TraesCS5B01G229500.1 | Wheat | plasma membrane | 44.04 | 42.22 |
| TraesCS5D01G236700.1 | Wheat | plasma membrane | 44.04 | 42.22 |
| Zm00001d035422_P001 | Maize | extracellular | 25.5 | 41.62 |
| Os09t0444900-01 | Rice | peroxisome, plasma membrane | 47.68 | 41.26 |
| HORVU5Hr1G066680.1 | Barley | extracellular, plasma membrane | 43.38 | 41.2 |
| Os09t0444800-01 | Rice | mitochondrion, plasma membrane, plastid | 42.38 | 40.63 |
| EER98982 | Sorghum | cytosol, peroxisome, plasma membrane | 43.05 | 36.93 |
| OQU93027 | Sorghum | extracellular | 18.54 | 35.67 |
| OQU84010 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 36.76 | 34.26 |
| CDY16500 | Canola | plasma membrane | 32.12 | 32.44 |
| CDX77245 | Canola | plasma membrane | 31.46 | 31.77 |
| HORVU5Hr1G066700.1 | Barley | plastid | 26.16 | 30.62 |
| CDY35545 | Canola | extracellular, plasma membrane | 26.16 | 30.38 |
| CDY29937 | Canola | plasma membrane | 25.5 | 29.17 |
| Zm00001d048662_P001 | Maize | plasma membrane | 31.46 | 27.94 |
| KXG29783 | Sorghum | extracellular, plasma membrane | 26.16 | 26.07 |
| CDY37527 | Canola | endoplasmic reticulum, extracellular, plasma membrane, plastid | 16.56 | 15.87 |
| CDY49048 | Canola | plasma membrane | 16.56 | 15.87 |
Protein Annotations
| EnsemblPlants:CDY42309 | EnsemblPlantsGene:GSBRNA2T00074549001 | GO:A0A078HY89 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF716_TMEM45 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF27 | PFAM:PF04819 | ProteinID:CDY42309 | ProteinID:CDY42309.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDF0EB | UniProt:A0A078HY89 | MapMan:35.2 | : |
Description
BnaC02g09150DBnaC02g09150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HY89]
Coordinates
chrLK032520:-:216718..217626
Molecular Weight (calculated)
34337.2 Da
IEP (calculated)
8.267
GRAVY (calculated)
0.428
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTLVGHIVP GFFFFSLGLW HLFNHIKLFS LHPKSYVSCT WFPLSKPRYL EPLVIIIASS LSISVELFLG QKNHQPFDPN DGTIPSNHLH NFEHSCISIT
101: FITYAAFAII FDKTRPVAHR DLINLIGALA FAQQLFLFHF HSSDHTGVEG HYHLLLQLVV FVSLVTTLLG IALPSSFLVS FVRSLSISFQ GIWLMSMACM
201: LWTPSLVPKD CFLHIEEGKH TIRCSSVKGL HRALSLVNIQ FSLFLVGVTI FAMWFYIFLQ RIYGEKIEYS ELRTKESKDT EIMMTMVEVH DTKSRNGVKS
301: LA
101: FITYAAFAII FDKTRPVAHR DLINLIGALA FAQQLFLFHF HSSDHTGVEG HYHLLLQLVV FVSLVTTLLG IALPSSFLVS FVRSLSISFQ GIWLMSMACM
201: LWTPSLVPKD CFLHIEEGKH TIRCSSVKGL HRALSLVNIQ FSLFLVGVTI FAMWFYIFLQ RIYGEKIEYS ELRTKESKDT EIMMTMVEVH DTKSRNGVKS
301: LA
001: MGTLVGHILP GFFFFALGLW HLFNHIKIFS LHPKSYIAPL WFPLSKPRYL EPLVIIIASS LSISVELFLG QKNHQPFDPN DGTIPSNHLH NFEHSCISFT
101: FITYAAFAIV FDKTRPIAHR SLINLIAALA FAQQLFLFHF HSSDHTGVEG HYHLLLQLVV FVSLVTTLLG IALPSSFILS FVRSLSVSFQ GIWLMSMACM
201: LWTPSLVPKD CFLHIEEGKH TIRCSDVKAL HRAISLVNIQ FSWFLVIITI FAMWFYIFLQ RIYGEKIEYS QLRTKD
101: FITYAAFAIV FDKTRPIAHR SLINLIAALA FAQQLFLFHF HSSDHTGVEG HYHLLLQLVV FVSLVTTLLG IALPSSFILS FVRSLSVSFQ GIWLMSMACM
201: LWTPSLVPKD CFLHIEEGKH TIRCSDVKAL HRAISLVNIQ FSWFLVIITI FAMWFYIFLQ RIYGEKIEYS QLRTKD
Arabidopsis Description
At5g19870 [Source:UniProtKB/TrEMBL;Acc:Q66GS4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.