Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033853.1-P | Field mustard | extracellular, plasma membrane | 98.46 | 96.97 |
| CDY29937 | Canola | plasma membrane | 96.92 | 95.45 |
| AT1G32127.1 | Thale cress | plasma membrane | 95.0 | 93.56 |
| KRH76363 | Soybean | extracellular, plasma membrane | 75.0 | 70.14 |
| KRH39651 | Soybean | plasma membrane | 74.62 | 69.78 |
| PGSC0003DMT400079341 | Potato | extracellular, plasma membrane | 71.92 | 68.25 |
| Solyc08g075970.2.1 | Tomato | extracellular, plasma membrane | 71.54 | 67.88 |
| KRH07683 | Soybean | extracellular | 68.08 | 65.31 |
| VIT_06s0009g01520.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 30.0 | 65.0 |
| VIT_03s0063g02210.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, mitochondrion | 22.31 | 64.44 |
| VIT_02s0033g00010.t01 | Wine grape | extracellular, plasma membrane | 38.08 | 61.88 |
| VIT_02s0033g00020.t01 | Wine grape | endoplasmic reticulum, extracellular | 24.23 | 60.58 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 66.54 | 57.67 |
| TraesCS2A01G193200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 55.77 | 57.54 |
| TraesCS2D01G194300.1 | Wheat | plasma membrane | 58.46 | 52.23 |
| TraesCS3D01G457800.1 | Wheat | plasma membrane | 58.46 | 52.23 |
| TraesCS3B01G507100.1 | Wheat | plasma membrane | 58.08 | 51.89 |
| TraesCS3A01G463700.1 | Wheat | plasma membrane | 58.08 | 51.19 |
| TraesCS2B01G624500.1 | Wheat | extracellular, plasma membrane, vacuole | 50.0 | 50.39 |
| TraesCSU01G182600.1 | Wheat | extracellular, plasma membrane, vacuole | 50.0 | 50.39 |
| HORVU3Hr1G099300.14 | Barley | extracellular | 58.46 | 49.84 |
| EES10142 | Sorghum | extracellular, plasma membrane, plastid | 56.54 | 49.33 |
| Zm00001d048804_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 56.15 | 49.32 |
| HORVU5Hr1G077170.1 | Barley | extracellular | 26.54 | 49.29 |
| TraesCS2B01G487900.1 | Wheat | plasma membrane | 54.23 | 48.96 |
| EES15542 | Sorghum | extracellular, plasma membrane | 55.0 | 48.47 |
| Zm00001d036834_P002 | Maize | plasma membrane | 53.85 | 48.44 |
| TraesCS2A01G466000.1 | Wheat | plasma membrane | 53.85 | 48.11 |
| TraesCS2A01G465800.1 | Wheat | plasma membrane | 53.08 | 47.92 |
| Os11t0621000-01 | Rice | extracellular, plasma membrane | 56.54 | 47.57 |
| TraesCSU01G010600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 51.92 | 47.54 |
| TraesCSU01G181800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 51.92 | 47.54 |
| Zm00001d048859_P001 | Maize | plasma membrane | 51.15 | 47.0 |
| TraesCS2D01G466300.1 | Wheat | plasma membrane | 52.69 | 46.92 |
| HORVU1Hr1G038410.1 | Barley | extracellular, plasma membrane | 31.15 | 46.55 |
| TraesCSU01G212900.1 | Wheat | plasma membrane | 51.92 | 43.83 |
| HORVU2Hr1G036130.2 | Barley | extracellular | 29.23 | 40.0 |
| HORVU2Hr1G124140.1 | Barley | cytosol, mitochondrion | 40.77 | 36.43 |
| CDY10579 | Canola | plasma membrane | 30.77 | 27.68 |
| CDY65755 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.77 | 27.68 |
| CDY10576 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.77 | 27.68 |
| CDY65753 | Canola | plasma membrane | 30.77 | 26.23 |
| CDY44949 | Canola | extracellular, plasma membrane | 30.38 | 26.16 |
| CDY42309 | Canola | plasma membrane | 30.38 | 26.16 |
| CDX77245 | Canola | plasma membrane | 29.23 | 25.42 |
| CDY16500 | Canola | plasma membrane | 29.23 | 25.42 |
| CDY26121 | Canola | extracellular, plasma membrane, vacuole | 29.62 | 24.37 |
| CDY08230 | Canola | plasma membrane | 26.54 | 24.13 |
| CDY10580 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.15 | 22.82 |
| CDY37527 | Canola | endoplasmic reticulum, extracellular, plasma membrane, plastid | 19.62 | 16.19 |
| CDY49048 | Canola | plasma membrane | 19.62 | 16.19 |
Protein Annotations
| EnsemblPlants:CDY35545 | EnsemblPlantsGene:GSBRNA2T00058605001 | GO:A0A078HAY2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF716_TMEM45 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF43 | PFAM:PF04819 | ProteinID:CDY35545 | ProteinID:CDY35545.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE8D0D | UniProt:A0A078HAY2 | MapMan:35.2 | : |
Description
BnaA05g16410DBnaA05g16410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAY2]
Coordinates
chrLK032354:+:184328..185181
Molecular Weight (calculated)
28724.5 Da
IEP (calculated)
6.978
GRAVY (calculated)
0.808
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSFKGHALP GTLFLVVGVW HIWSSVVRFI SNPNSFRVRV WHPLPAFKYL ELYVVTIGSF IDLCIEFFYS THLNFFVNGV LNPSHMNDFE HSGMLLMFFI
101: LGLIALLSEK TRLLPLPQEA LCLIAATAFT AEGLLFFFHS TSHKGLEGYY HLLLVFLIGL CVISSIAGAI CPTSFPVDLC NGIAMTLQGL WFYQTAFTLY
201: GPMMPQGCGL KENSVVCSSV DSIVSGEFLA NFQLFSLVLA VLVCLVGSYV FAASRFGVSR
101: LGLIALLSEK TRLLPLPQEA LCLIAATAFT AEGLLFFFHS TSHKGLEGYY HLLLVFLIGL CVISSIAGAI CPTSFPVDLC NGIAMTLQGL WFYQTAFTLY
201: GPMMPQGCGL KENSVVCSSV DSIVSGEFLA NFQLFSLVLA VLVCLVGSYV FAASRFGVSR
001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
Arabidopsis Description
Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.