Factsheet for TraesCSU01G212900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G182600.1	Wheat	extracellular, plasma membrane, vacuole	78.9	94.19
TraesCS2B01G624500.1	Wheat	extracellular, plasma membrane, vacuole	78.9	94.19
TraesCSU01G181800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	78.57	85.21
TraesCSU01G010600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	78.57	85.21
Zm00001d048859_P001	Maize	plasma membrane	67.86	73.85
HORVU2Hr1G124140.1	Barley	cytosol, mitochondrion	58.77	62.2
CDY35545	Canola	extracellular, plasma membrane	43.83	51.92
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	50.32	51.67
Bra033853.1-P	Field mustard	extracellular, plasma membrane	44.16	51.52
CDY29937	Canola	plasma membrane	44.16	51.52
AT1G32127.1	Thale cress	plasma membrane	43.83	51.14
KRH76363	Soybean	extracellular, plasma membrane	45.13	50.0
KRH39651	Soybean	plasma membrane	43.83	48.56
PGSC0003DMT400079341	Potato	extracellular, plasma membrane	43.18	48.54
Solyc08g075970.2.1	Tomato	extracellular, plasma membrane	43.18	48.54
KRH07683	Soybean	extracellular	42.21	47.97
VIT_02s0033g00020.t01	Wine grape	endoplasmic reticulum, extracellular	15.58	46.15
VIT_02s0033g00010.t01	Wine grape	extracellular, plasma membrane	22.73	43.75
VIT_06s0009g01520.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	16.88	43.33
VIT_03s0063g02210.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, mitochondrion	12.34	42.22

Protein Annotations

EnsemblPlants:TraesCSU01G212900.1	EnsemblPlantsGene:TraesCSU01G212900	InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF43	PFAM:PF04819
SEG:seg	SignalP:SignalP-TM	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrUn:-:315957278..315958335

Molecular Weight (calculated)

33395.8 Da

IEP (calculated)

6.869

GRAVY (calculated)

0.602

Length

308 amino acids

Sequence
(BLAST)

001: MGDFVGHALP GSLLLLVGLW RVWASIARFA TDPTAFRVRV CSSSAGPRLL ELYVVTGGAF LDMCMELFYS NPLRVLTGRG FDPTHLNGLE HASMLLMFFL
101: FGALALLSHK TRYLPLSDAA LSLVFACAFT SEFLLFYFHS TTQVGLEAYY HRLLLLIGLC IAAIVLGALL PASFPADLGT GVLITVQGLW FFQTGFTLYG
201: PTLPAGCAHS FDAPGADAHV ECRDGPAQER AEHLAIFQLF GLVFLAFVYV LGCYAVAAAR FGHQDLTTTK DMHIDVGGID GARSSGCCCC CSSSSWIWYR
301: KVSTTCLK

Best Arabidopsis Sequence Match ( AT1G32127.1 )
(BLAST)

001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR

Arabidopsis Description

Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.