Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 4
- plasma membrane 3
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76363 | Soybean | extracellular, plasma membrane | 77.86 | 75.9 |
| KRH39651 | Soybean | plasma membrane | 77.86 | 75.9 |
| AT1G32127.1 | Thale cress | plasma membrane | 67.9 | 69.7 |
| CDY29937 | Canola | plasma membrane | 66.42 | 68.18 |
| CDY35545 | Canola | extracellular, plasma membrane | 65.31 | 68.08 |
| Bra033853.1-P | Field mustard | extracellular, plasma membrane | 66.05 | 67.8 |
| PGSC0003DMT400079341 | Potato | extracellular, plasma membrane | 64.58 | 63.87 |
| Solyc08g075970.2.1 | Tomato | extracellular, plasma membrane | 64.21 | 63.5 |
| VIT_03s0063g02210.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, mitochondrion | 21.03 | 63.33 |
| VIT_06s0009g01520.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 26.57 | 60.0 |
| VIT_02s0033g00010.t01 | Wine grape | extracellular, plasma membrane | 34.69 | 58.75 |
| VIT_02s0033g00020.t01 | Wine grape | endoplasmic reticulum, extracellular | 22.51 | 58.65 |
| TraesCS2A01G193200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 54.24 | 58.33 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 62.36 | 56.33 |
| TraesCS3D01G457800.1 | Wheat | plasma membrane | 57.2 | 53.26 |
| TraesCS2D01G194300.1 | Wheat | plasma membrane | 57.2 | 53.26 |
| TraesCS3B01G507100.1 | Wheat | plasma membrane | 56.46 | 52.58 |
| TraesCS3A01G463700.1 | Wheat | plasma membrane | 56.83 | 52.2 |
| EES10142 | Sorghum | extracellular, plasma membrane, plastid | 56.09 | 51.01 |
| HORVU3Hr1G099300.14 | Barley | extracellular | 56.83 | 50.49 |
| Zm00001d048859_P001 | Maize | plasma membrane | 52.4 | 50.18 |
| HORVU5Hr1G077170.1 | Barley | extracellular | 25.83 | 50.0 |
| Os11t0621000-01 | Rice | extracellular, plasma membrane | 55.35 | 48.54 |
| TraesCSU01G182600.1 | Wheat | extracellular, plasma membrane, vacuole | 46.13 | 48.45 |
| TraesCS2B01G624500.1 | Wheat | extracellular, plasma membrane, vacuole | 46.13 | 48.45 |
| EES15542 | Sorghum | extracellular, plasma membrane | 52.4 | 48.14 |
| TraesCS2B01G487900.1 | Wheat | plasma membrane | 50.92 | 47.92 |
| TraesCS2A01G466000.1 | Wheat | plasma membrane | 51.29 | 47.77 |
| Zm00001d048804_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 52.03 | 47.64 |
| TraesCS2A01G465800.1 | Wheat | plasma membrane | 50.55 | 47.57 |
| Zm00001d036834_P002 | Maize | plasma membrane | 50.18 | 47.06 |
| TraesCS2D01G466300.1 | Wheat | plasma membrane | 50.55 | 46.92 |
| TraesCSU01G010600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 48.71 | 46.48 |
| TraesCSU01G181800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 48.71 | 46.48 |
| HORVU1Hr1G038410.1 | Barley | extracellular, plasma membrane | 29.15 | 45.4 |
| TraesCSU01G212900.1 | Wheat | plasma membrane | 47.97 | 42.21 |
| HORVU2Hr1G036130.2 | Barley | extracellular | 27.68 | 39.47 |
| HORVU2Hr1G124140.1 | Barley | cytosol, mitochondrion | 39.85 | 37.11 |
| KRH11368 | Soybean | extracellular | 8.49 | 29.49 |
| KRH24549 | Soybean | plasma membrane | 27.31 | 25.08 |
| KRH29555 | Soybean | extracellular, plasma membrane | 27.31 | 25.0 |
| KRH51013 | Soybean | extracellular, plasma membrane | 28.41 | 24.68 |
| KRH20920 | Soybean | plasma membrane | 28.04 | 24.68 |
| KRH51014 | Soybean | extracellular, plasma membrane | 28.04 | 24.6 |
| KRH36022 | Soybean | plasma membrane | 27.31 | 24.34 |
| KRH02131 | Soybean | plasma membrane | 18.45 | 24.27 |
| KRG90737 | Soybean | plasma membrane | 26.94 | 23.55 |
| KRH65232 | Soybean | plasma membrane | 25.09 | 22.74 |
Protein Annotations
| EMBL:ACUP02010077 | EnsemblPlants:KRH07683 | EnsemblPlantsGene:GLYMA_16G104000 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF716_TMEM45 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF43 | PFAM:PF04819 | ProteinID:KRH07682.1 | ProteinID:KRH07683 |
| ProteinID:KRH07683.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000233B341 | UniProt:I1MMK3 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr16:+:21057140..21060970
Molecular Weight (calculated)
29779.7 Da
IEP (calculated)
7.762
GRAVY (calculated)
0.634
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSFIGHILP GTLFLLVGTW HIWGSVMRYV SNPKTFRVQV WNPVPGFNGR LKHLELYVIS IGAFIDLCVE LLLATRLRFF VGGALNTTYF NNFEHSGMLL
101: MFLIFGVVAL LSEKTRRLPL PENALCLIAA AAFCAEYLLF YFHSTTHKGL EGYYHVLLAF LIGLCIISSV SGALLPTSFP VDLCNGIAIA LQGIWFYQTA
201: FVLYGPMLPS GCKLRDSNIT CHPKESEVRG ELFANAQLFV AVLAVLVGTV ASYGFAASRY GNCEELASNA S
101: MFLIFGVVAL LSEKTRRLPL PENALCLIAA AAFCAEYLLF YFHSTTHKGL EGYYHVLLAF LIGLCIISSV SGALLPTSFP VDLCNGIAIA LQGIWFYQTA
201: FVLYGPMLPS GCKLRDSNIT CHPKESEVRG ELFANAQLFV AVLAVLVGTV ASYGFAASRY GNCEELASNA S
001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
Arabidopsis Description
Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.