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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G194300.1 Wheat plasma membrane 96.43 83.51
TraesCS3A01G463700.1 Wheat plasma membrane 86.9 74.24
HORVU3Hr1G099300.14 Barley extracellular 86.11 71.15
Os11t0621000-01 Rice extracellular, plasma membrane 79.76 65.05
TraesCS2A01G465800.1 Wheat plasma membrane 66.27 57.99
KRH76363 Soybean extracellular, plasma membrane 63.1 57.19
TraesCS2A01G466000.1 Wheat plasma membrane 65.87 57.04
CDY35545 Canola extracellular, plasma membrane 57.54 55.77
KRH39651 Soybean plasma membrane 61.51 55.76
CDY29937 Canola plasma membrane 58.33 55.68
AT1G32127.1 Thale cress plasma membrane 57.94 55.3
VIT_06s0009g01520.t01 Wine grape endoplasmic reticulum, plasma membrane, plastid 26.19 55.0
Bra033853.1-P Field mustard extracellular, plasma membrane 57.54 54.92
KRH07683 Soybean extracellular 58.33 54.24
VIT_02s0033g00010.t01 Wine grape extracellular, plasma membrane 34.13 53.75
VIT_03s0063g02210.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, mitochondrion 19.05 53.33
PGSC0003DMT400079341 Potato extracellular, plasma membrane 57.94 53.28
Solyc08g075970.2.1 Tomato extracellular, plasma membrane 57.54 52.92
GSMUA_Achr11P... Banana extracellular, plasma membrane 62.7 52.67
VIT_02s0033g00020.t01 Wine grape endoplasmic reticulum, extracellular 15.87 38.46
TraesCS3A01G084100.1 Wheat plasma membrane 32.54 26.03
TraesCS5A01G231300.1 Wheat plasma membrane 29.76 23.73
TraesCS5A01G231100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 29.76 23.66
TraesCS5A01G231200.1 Wheat plasma membrane 28.17 22.54
TraesCS7A01G195700.1 Wheat plasma membrane 21.43 17.7
Protein Annotations
EnsemblPlants:TraesCS2A01G193200.1EnsemblPlantsGene:TraesCS2A01G193200InterPro:DUF716_TMEM45PANTHER:PTHR16007PANTHER:PTHR16007:SF43PFAM:PF04819
SEG:segTMHMM:TMhelixMapMan:35.2:::
Description
No Description!
Coordinates
chr2A:-:161801529..161813647
Molecular Weight (calculated)
27209.4 Da
IEP (calculated)
6.356
GRAVY (calculated)
0.708
Length
252 amino acids
Sequence
(BLAST)
001: MGSFKGHLLP GTLFLAVGAW NVWAAVARFA FDPAGFRLLV WNLVGGGSSG ALRHLELYVI AGGAFLDMCV EVLYSTHLHI FAPGGGVNPA HLNDLEHGGM
101: LLMFFLFGAL ALLSEKTRYL PLTEGALCVV LATAFTAELL LFYFHSTTHQ GLEGYYHYLL VLLIGLCVAS TVLGALLPVS FPVDLASGVL MTLQGMWFYQ
201: MAFTLYGPPC PAGCHHDAGR NIECHGQAAG ERAEQLANFQ LFACVFLVFA YT
Best Arabidopsis Sequence Match ( AT1G32127.2 )
(BLAST)
001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR
Arabidopsis Description
Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.