Factsheet for TraesCS5A01G231200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
mitochondrion 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G229500.1	Wheat	plasma membrane	96.19	96.19
TraesCS5D01G236700.1	Wheat	plasma membrane	95.56	95.56
HORVU5Hr1G066680.1	Barley	extracellular, plasma membrane	93.33	92.45
Zm00001d020651_P001	Maize	plasma membrane	77.78	79.55
Os09t0444800-01	Rice	mitochondrion, plasma membrane, plastid	76.83	76.83
HORVU5Hr1G066700.1	Barley	plastid	58.73	71.71
EER98982	Sorghum	cytosol, peroxisome, plasma membrane	77.46	69.32
TraesCS5A01G231300.1	Wheat	plasma membrane	50.48	50.32
TraesCS5A01G231100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	50.48	50.16
KRH11368	Soybean	extracellular	12.06	48.72
GSMUA_Achr3P07810_001	Banana	extracellular, plasma membrane	47.3	47.91
TraesCS3A01G084100.1	Wheat	plasma membrane	47.62	47.62
AT5G19870.1	Thale cress	plasma membrane	41.59	47.46
GSMUA_Achr5P23140_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	46.98	47.44
GSMUA_Achr7P18580_001	Banana	extracellular, plasma membrane, vacuole	40.63	46.89
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	38.73	45.52
Solyc01g017600.2.1	Tomato	extracellular, plasma membrane, vacuole	45.08	45.51
VIT_06s0004g00960.t01	Wine grape	extracellular, plasma membrane, vacuole	43.81	45.1
Solyc04g014520.1.1	Tomato	plasma membrane	42.22	44.78
CDY44949	Canola	extracellular, plasma membrane	42.86	44.7
PGSC0003DMT400048713	Potato	extracellular, plasma membrane, vacuole	44.13	44.41
Bra020070.1-P	Field mustard	extracellular, plasma membrane	42.54	44.37
KRH20920	Soybean	plasma membrane	43.17	44.16
CDY42309	Canola	plasma membrane	42.22	44.04
Bra030875.1-P	Field mustard	extracellular, plasma membrane	42.54	43.37
CDY65755	Canola	endoplasmic reticulum, extracellular, plasma membrane	39.68	43.25
CDY10576	Canola	endoplasmic reticulum, extracellular, plasma membrane	39.68	43.25
CDY10579	Canola	plasma membrane	39.68	43.25
Solyc01g006050.2.1	Tomato	extracellular, golgi, plasma membrane	43.17	43.04
AT1G55240.1	Thale cress	plasma membrane	42.22	42.77
KRH51013	Soybean	extracellular, plasma membrane	42.22	42.63
VIT_02s0087g00750.t01	Wine grape	extracellular, plasma membrane	40.95	42.16
KRH51014	Soybean	extracellular, plasma membrane	40.95	41.75
PGSC0003DMT400082049	Potato	extracellular, plasma membrane	41.9	41.64
AT1G55230.1	Thale cress	plasma membrane	39.37	41.33
CDY65753	Canola	plasma membrane	39.68	40.98
CDY08230	Canola	plasma membrane	37.14	40.91
CDY26121	Canola	extracellular, plasma membrane, vacuole	40.32	40.19
KRH02131	Soybean	plasma membrane	26.03	39.81
CDY10580	Canola	endoplasmic reticulum, plasma membrane, vacuole	37.14	39.26
KRH36022	Soybean	plasma membrane	37.46	38.82
KRH65232	Soybean	plasma membrane	36.83	38.8
Solyc01g006070.2.1	Tomato	extracellular, plasma membrane	37.46	38.31
Bra011903.1-P	Field mustard	cytosol	27.94	38.1
KRG90737	Soybean	plasma membrane	36.83	37.42
TraesCS2A01G466000.1	Wheat	plasma membrane	26.67	28.87
TraesCS3A01G463700.1	Wheat	plasma membrane	26.67	28.47
TraesCS2A01G465800.1	Wheat	plasma membrane	26.03	28.47
TraesCS2A01G193200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	22.54	28.17
TraesCS7A01G195700.1	Wheat	plasma membrane	19.05	19.67

Protein Annotations

EnsemblPlants:TraesCS5A01G231200.1	EnsemblPlantsGene:TraesCS5A01G231200	InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF35	PFAM:PF04819
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr5A:-:446636799..446637746

Molecular Weight (calculated)

34702.2 Da

IEP (calculated)

7.267

GRAVY (calculated)

0.337

Length

315 amino acids

Sequence
(BLAST)

001: MGGTPRSSIG HILPGAGFFA VGLWHLFNHI RLFSQRPDSY VAPVWFPVPR ARYLEPALVI AGSALEFVME MFVDHSTFLP FDADGSIPSD RLHNHEHAII
101: CLALVVYAGA AVHLDRARAP GRRALCLLLV SVVFAQELLV FHFHSTDHAG VEGQFHWILQ VVVAACLGTS LLGVGFPRSF AVSLARSACI MFHGVWLAVI
201: GAMVWVPSMV PKGCSLVRED GRDTVRCHSK ASLHRARALV NLQFGWYLSF ITVFVLTVYL YVCSRYPADQ AYARLLPKAG EEEEEHDLEA RKCGVPRDGG
301: SDVHARGFAP LEMEA

Best Arabidopsis Sequence Match ( AT5G19870.1 )
(BLAST)

001: MGTLVGHILP GFFFFALGLW HLFNHIKIFS LHPKSYIAPL WFPLSKPRYL EPLVIIIASS LSISVELFLG QKNHQPFDPN DGTIPSNHLH NFEHSCISFT
101: FITYAAFAIV FDKTRPIAHR SLINLIAALA FAQQLFLFHF HSSDHTGVEG HYHLLLQLVV FVSLVTTLLG IALPSSFILS FVRSLSVSFQ GIWLMSMACM
201: LWTPSLVPKD CFLHIEEGKH TIRCSDVKAL HRAISLVNIQ FSWFLVIITI FAMWFYIFLQ RIYGEKIEYS QLRTKD

Arabidopsis Description

At5g19870 [Source:UniProtKB/TrEMBL;Acc:Q66GS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.