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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, golgi, plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • plasma membrane 5
  • golgi 4
  • endoplasmic reticulum 3
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:golgi
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400082049 Potato extracellular, plasma membrane 93.99 93.69
Solyc01g017600.2.1 Tomato extracellular, plasma membrane, vacuole 71.52 72.44
Solyc04g014520.1.1 Tomato plasma membrane 66.77 71.04
VIT_02s0087g00750.t01 Wine grape extracellular, plasma membrane 62.66 64.71
Solyc01g006070.2.1 Tomato extracellular, plasma membrane 62.03 63.64
KRH51013 Soybean extracellular, plasma membrane 62.66 63.46
KRH20920 Soybean plasma membrane 61.71 63.31
GSMUA_Achr7P18580_001 Banana extracellular, plasma membrane, vacuole 54.11 62.64
VIT_06s0004g00960.t01 Wine grape extracellular, plasma membrane, vacuole 60.13 62.09
GSMUA_Achr10P... Banana extracellular, plasma membrane 52.53 61.94
KRH51014 Soybean extracellular, plasma membrane 59.49 60.84
KRH11368 Soybean extracellular 14.87 60.26
GSMUA_Achr5P23140_001 Banana endoplasmic reticulum, extracellular, plasma membrane 58.86 59.62
CDY08230 Canola plasma membrane 53.48 59.09
AT5G19870.1 Thale cress plasma membrane 51.27 58.7
CDY26121 Canola extracellular, plasma membrane, vacuole 58.54 58.54
GSMUA_Achr3P07810_001 Banana extracellular, plasma membrane 57.28 58.2
AT1G55230.1 Thale cress plasma membrane 55.06 58.0
KRH02131 Soybean plasma membrane 36.71 56.31
CDY44949 Canola extracellular, plasma membrane 53.8 56.29
CDY42309 Canola plasma membrane 53.48 55.96
Bra020070.1-P Field mustard extracellular, plasma membrane 53.48 55.96
KRH36022 Soybean plasma membrane 53.8 55.92
Bra011903.1-P Field mustard cytosol 40.82 55.84
Zm00001d020652_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 55.7 55.35
TraesCS5A01G231100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 55.38 55.2
TraesCS5A01G231300.1 Wheat plasma membrane 54.75 54.75
EER98987 Sorghum endoplasmic reticulum, plasma membrane 55.38 54.69
KRG90737 Soybean plasma membrane 53.16 54.19
KRH65232 Soybean plasma membrane 51.27 54.18
TraesCS5B01G229600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 54.11 53.94
TraesCS5D01G236600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 54.11 53.77
AT1G55240.1 Thale cress plasma membrane 52.53 53.38
TraesCS3A01G084100.1 Wheat plasma membrane 52.85 53.02
Bra030875.1-P Field mustard extracellular, plasma membrane 51.27 52.43
CDY10580 Canola endoplasmic reticulum, plasma membrane, vacuole 49.37 52.35
HORVU5Hr1G066720.1 Barley endoplasmic reticulum 51.9 50.46
EER98986 Sorghum endoplasmic reticulum, plasma membrane 49.05 50.32
CDY10576 Canola endoplasmic reticulum, extracellular, plasma membrane 45.89 50.17
CDY65755 Canola endoplasmic reticulum, extracellular, plasma membrane 45.89 50.17
Os08t0462800-01 Rice extracellular, plasma membrane 49.68 49.84
CDY10579 Canola plasma membrane 45.57 49.83
Os09t0444900-01 Rice peroxisome, plasma membrane 54.75 49.57
OQU80608 Sorghum endoplasmic reticulum, extracellular, plasma membrane 47.78 47.48
CDY65753 Canola plasma membrane 45.57 47.21
Zm00001d020651_P001 Maize plasma membrane 42.41 43.51
TraesCS5A01G231200.1 Wheat plasma membrane 43.04 43.17
TraesCS5B01G229500.1 Wheat plasma membrane 42.09 42.22
OQU93027 Sorghum extracellular 20.89 42.04
HORVU5Hr1G066680.1 Barley extracellular, plasma membrane 42.09 41.82
TraesCS5D01G236700.1 Wheat plasma membrane 41.46 41.59
Os09t0444800-01 Rice mitochondrion, plasma membrane, plastid 40.82 40.95
Zm00001d035422_P001 Maize extracellular 23.42 40.0
EER98982 Sorghum cytosol, peroxisome, plasma membrane 41.46 37.22
Solyc10g050430.1.1 Tomato extracellular, plasma membrane 31.65 34.13
OQU84010 Sorghum endoplasmic reticulum, extracellular, plasma membrane 34.18 33.33
HORVU5Hr1G066700.1 Barley plastid 26.27 32.17
Solyc08g075970.2.1 Tomato extracellular, plasma membrane 25.63 29.56
Zm00001d048662_P001 Maize plasma membrane 30.38 28.24
KXG29783 Sorghum extracellular, plasma membrane 24.05 25.08
Solyc02g087260.1.1 Tomato plasma membrane 21.84 20.54
Protein Annotations
EnsemblPlants:Solyc01g006050.2.1EnsemblPlantsGene:Solyc01g006050.2GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:DUF716_TMEM45
ncoils:CoilPANTHER:PTHR16007PANTHER:PTHR16007:SF27PFAM:PF04819SEG:segTMHMM:TMhelix
UniParc:UPI0002761EC4UniProt:K4ASH1MapMan:35.2:::
Description
No Description!
Coordinates
chr1:-:729095..730484
Molecular Weight (calculated)
36225.5 Da
IEP (calculated)
7.068
GRAVY (calculated)
0.276
Length
316 amino acids
Sequence
(BLAST)
001: MGTLVGHVAP GFGFFLIGIW HLINHIRLHA LHPKSYTSLP WFPTPRIRYL ELFLIIGGCL ASISMELFIG PKKHQPLDID GTIPSNHLHN FEHSNISLTF
101: FVYALFTIIF DKVTLQPQTK YGMTQLLGAI AFGQQLLLFH LHSSDHMGVE GQYHWLLQIA IFVCLATTLL GIQFPKSFLN SFVRSYSIMF QGIWLMVMGF
201: MLWTPKFTPK GCFINFEEGH KVVRCENHEA LERAKALVNI QFSWYIVGIT IFCVTLYLIL IKIFQEKVEY LSLNSKFEEV EDDLEDVEAQ TTSKNGASNR
301: FLEMGKMFAS TSDMER
Best Arabidopsis Sequence Match ( AT1G55230.1 )
(BLAST)
001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
Arabidopsis Description
Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.