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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d035422_P001 Maize extracellular 52.16 91.35
KXG29783 Sorghum extracellular, plasma membrane 53.4 57.1
EER98982 Sorghum cytosol, peroxisome, plasma membrane 50.0 46.02
KRH11368 Soybean extracellular 10.49 43.59
GSMUA_Achr5P23140_001 Banana endoplasmic reticulum, extracellular, plasma membrane 38.27 39.74
OQU80608 Sorghum endoplasmic reticulum, extracellular, plasma membrane 38.89 39.62
GSMUA_Achr7P18580_001 Banana extracellular, plasma membrane, vacuole 33.33 39.56
GSMUA_Achr3P07810_001 Banana extracellular, plasma membrane 37.35 38.91
EER98987 Sorghum endoplasmic reticulum, plasma membrane 38.27 38.75
AT5G19870.1 Thale cress plasma membrane 32.72 38.41
EER98986 Sorghum endoplasmic reticulum, plasma membrane 35.8 37.66
GSMUA_Achr10P... Banana extracellular, plasma membrane 30.86 37.31
VIT_06s0004g00960.t01 Wine grape extracellular, plasma membrane, vacuole 35.19 37.25
AT1G55240.1 Thale cress plasma membrane 35.49 36.98
Bra030875.1-P Field mustard extracellular, plasma membrane 35.19 36.89
KRH65232 Soybean plasma membrane 33.95 36.79
CDY42309 Canola plasma membrane 34.26 36.76
AT1G55230.1 Thale cress plasma membrane 33.95 36.67
Solyc01g017600.2.1 Tomato extracellular, plasma membrane, vacuole 35.19 36.54
CDY44949 Canola extracellular, plasma membrane 33.95 36.42
Bra020070.1-P Field mustard extracellular, plasma membrane 33.64 36.09
KRH20920 Soybean plasma membrane 33.95 35.71
KRH51013 Soybean extracellular, plasma membrane 34.26 35.58
VIT_02s0087g00750.t01 Wine grape extracellular, plasma membrane 33.33 35.29
CDY65755 Canola endoplasmic reticulum, extracellular, plasma membrane 31.48 35.29
CDY10576 Canola endoplasmic reticulum, extracellular, plasma membrane 31.48 35.29
KRH51014 Soybean extracellular, plasma membrane 33.64 35.28
PGSC0003DMT400048713 Potato extracellular, plasma membrane, vacuole 33.95 35.14
Solyc04g014520.1.1 Tomato plasma membrane 32.1 35.02
CDY10579 Canola plasma membrane 30.86 34.6
CDY10580 Canola endoplasmic reticulum, plasma membrane, vacuole 31.79 34.56
KRH02131 Soybean plasma membrane 21.91 34.47
KRH36022 Soybean plasma membrane 32.1 34.21
Solyc01g006050.2.1 Tomato extracellular, golgi, plasma membrane 33.33 34.18
CDY26121 Canola extracellular, plasma membrane, vacuole 33.33 34.18
CDY08230 Canola plasma membrane 29.94 33.92
KRG90737 Soybean plasma membrane 32.41 33.87
Solyc01g006070.2.1 Tomato extracellular, plasma membrane 31.79 33.44
PGSC0003DMT400082049 Potato extracellular, plasma membrane 32.41 33.12
CDY65753 Canola plasma membrane 30.86 32.79
Bra011903.1-P Field mustard cytosol 22.53 31.6
OQU93027 Sorghum extracellular 15.12 31.21
OQU80610 Sorghum plasma membrane 30.25 28.32
EES10142 Sorghum extracellular, plasma membrane, plastid 24.69 26.85
EES15542 Sorghum extracellular, plasma membrane 22.84 25.08
OQU76145 Sorghum extracellular, plasma membrane, plastid 18.52 19.93
Protein Annotations
EnsemblPlants:OQU84010EnsemblPlantsGene:SORBI_3005G215200GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:DUF716_TMEM45
PANTHER:PTHR16007PANTHER:PTHR16007:SF35PFAM:PF04819ProteinID:OQU84010ProteinID:OQU84010.1SEG:seg
TMHMM:TMhelixUniParc:UPI000B42400EUniProt:A0A1Z5RJR0MapMan:35.2::
Description
hypothetical protein
Coordinates
chr5:-:70119357..70120799
Molecular Weight (calculated)
35330.9 Da
IEP (calculated)
6.578
GRAVY (calculated)
0.342
Length
324 amino acids
Sequence
(BLAST)
001: MMMPSGAIDK SISHILGGLM FSGLGLWHLF NHIRLFVSLP STSSSSYVAP AWFPAPRVRH LELIVMLAGG VYGFATQMLA YSPMPFNADG SIPPERLPNH
101: EHAIMYASLL VYAGSAIYLD RHRHRHRHTT LCMLLLAAVF AQELFVFHVH STDHAGVEGR LHWFLQAAAA TCLSTALLGA AGGGGGLPAE VQFAVSLVRS
201: ASLAFQGLWG VVIGVVWIPG MAPKGCFLDD GGVNLRCHGE DSLHHAVAVV NLQFGWCFVL VTVLVLGVYV YVCKMYTAGD GEVYGRLPEE EAGDEDDHHH
301: DMKTRNCKLA VHDVHEFMSM EIDV
Best Arabidopsis Sequence Match ( AT1G55230.1 )
(BLAST)
001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
Arabidopsis Description
Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.