Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08230 Canola plasma membrane 96.97 78.32
AT1G55230.1 Thale cress plasma membrane 74.03 57.0
Bra030875.1-P Field mustard extracellular, plasma membrane 65.8 49.19
VIT_02s0087g00750.t01 Wine grape extracellular, plasma membrane 64.07 48.37
KRH51013 Soybean extracellular, plasma membrane 60.61 44.87
GSMUA_Achr5P23140_001 Banana endoplasmic reticulum, extracellular, plasma membrane 59.31 43.91
KRH20920 Soybean plasma membrane 58.44 43.83
VIT_06s0004g00960.t01 Wine grape extracellular, plasma membrane, vacuole 56.28 42.48
KRH02131 Soybean plasma membrane 37.66 42.23
KRH51014 Soybean extracellular, plasma membrane 55.84 41.75
PGSC0003DMT400082049 Potato extracellular, plasma membrane 57.14 41.64
GSMUA_Achr3P07810_001 Banana extracellular, plasma membrane 55.84 41.48
Bra020070.1-P Field mustard extracellular, plasma membrane 54.11 41.39
Solyc01g006050.2.1 Tomato extracellular, golgi, plasma membrane 55.84 40.82
Solyc04g014520.1.1 Tomato plasma membrane 52.38 40.74
Solyc01g017600.2.1 Tomato extracellular, plasma membrane, vacuole 54.11 40.06
KRH65232 Soybean plasma membrane 51.08 39.46
PGSC0003DMT400048713 Potato extracellular, plasma membrane, vacuole 53.25 39.3
GSMUA_Achr7P18580_001 Banana extracellular, plasma membrane, vacuole 46.32 39.19
KRH36022 Soybean plasma membrane 51.08 38.82
GSMUA_Achr10P... Banana extracellular, plasma membrane 45.02 38.81
KRG90737 Soybean plasma membrane 51.08 38.06
Zm00001d020652_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 51.52 37.42
TraesCS5A01G231300.1 Wheat plasma membrane 51.08 37.34
TraesCS5D01G236600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 51.08 37.11
EER98987 Sorghum endoplasmic reticulum, plasma membrane 51.08 36.88
Os08t0462800-01 Rice extracellular, plasma membrane 49.35 36.19
TraesCS3A01G084100.1 Wheat plasma membrane 48.92 35.87
TraesCS5B01G229600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 48.92 35.65
Solyc01g006070.2.1 Tomato extracellular, plasma membrane 47.19 35.39
TraesCS5A01G231100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 48.48 35.33
OQU80608 Sorghum endoplasmic reticulum, extracellular, plasma membrane 48.05 34.91
EER98986 Sorghum endoplasmic reticulum, plasma membrane 45.89 34.42
Os09t0444900-01 Rice peroxisome, plasma membrane 51.95 34.38
HORVU5Hr1G066720.1 Barley endoplasmic reticulum 48.05 34.15
Zm00001d020651_P001 Maize plasma membrane 39.83 29.87
Os09t0444800-01 Rice mitochondrion, plasma membrane, plastid 40.26 29.52
TraesCS5A01G231200.1 Wheat plasma membrane 38.1 27.94
TraesCS5B01G229500.1 Wheat plasma membrane 37.66 27.62
TraesCS5D01G236700.1 Wheat plasma membrane 37.23 27.3
EER98982 Sorghum cytosol, peroxisome, plasma membrane 41.13 26.99
HORVU5Hr1G066680.1 Barley extracellular, plasma membrane 36.8 26.73
OQU93027 Sorghum extracellular 17.32 25.48
HORVU5Hr1G066700.1 Barley plastid 27.27 24.42
Zm00001d035422_P001 Maize extracellular 18.18 22.7
OQU84010 Sorghum endoplasmic reticulum, extracellular, plasma membrane 31.6 22.53
Bra014190.1-P Field mustard plasma membrane 27.71 21.4
Zm00001d048662_P001 Maize plasma membrane 27.71 18.82
Bra033853.1-P Field mustard extracellular, plasma membrane 19.48 17.05
KXG29783 Sorghum extracellular, plasma membrane 22.08 16.83
Bra039124.1-P Field mustard plasma membrane 19.05 13.97
KRH11368 Soybean extracellular 3.03 8.97
Protein Annotations
EnsemblPlants:Bra011903.1EnsemblPlants:Bra011903.1-PEnsemblPlantsGene:Bra011903GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:DUF716_TMEM45PANTHER:PTHR16007PANTHER:PTHR16007:SF27PFAM:PF04819SEG:segTMHMM:TMhelix
UniParc:UPI000254134DUniProt:M4D5Z5MapMan:35.2:::
Description
AT1G55230 (E=4e-037) | unknown protein
Coordinates
chrA07:-:11446225..11446997
Molecular Weight (calculated)
26103.5 Da
IEP (calculated)
5.709
GRAVY (calculated)
0.116
Length
231 amino acids
Sequence
(BLAST)
001: MLSSSASIAM ELFIGPKKHQ PFDSDGTIPS NHLHNFEHSS ISMSFLVYAV FALVLDQARP KAVSKELTIL AAASAFAQQL FLFHHHSADH MGIEGQYHKL
101: LQLVIFVSLL TTLMVMVYML WTPSLISKWC FLHEEKGHQV VRCSSDLALQ RAKSLVNIEF SWFFVGNTIF VMSLYLILDG VYGENIEYSS LTTKDQVEED
201: GEKQEDIESL KMSNSGFVQM GINFGDRDVE R
Best Arabidopsis Sequence Match ( AT1G55230.1 )
(BLAST)
001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
Arabidopsis Description
Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.