Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26121 | Canola | extracellular, plasma membrane, vacuole | 83.33 | 79.11 |
| CDY08230 | Canola | plasma membrane | 74.33 | 77.97 |
| Bra011903.1-P | Field mustard | cytosol | 57.0 | 74.03 |
| AT1G55240.1 | Thale cress | plasma membrane | 68.0 | 65.59 |
| VIT_02s0087g00750.t01 | Wine grape | extracellular, plasma membrane | 64.67 | 63.4 |
| AT5G19870.1 | Thale cress | plasma membrane | 57.67 | 62.68 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 54.0 | 60.45 |
| GSMUA_Achr7P18580_001 | Banana | extracellular, plasma membrane, vacuole | 55.0 | 60.44 |
| KRH20920 | Soybean | plasma membrane | 61.67 | 60.06 |
| GSMUA_Achr5P23140_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 62.33 | 59.94 |
| KRH51013 | Soybean | extracellular, plasma membrane | 60.67 | 58.33 |
| GSMUA_Achr3P07810_001 | Banana | extracellular, plasma membrane | 60.33 | 58.2 |
| Solyc04g014520.1.1 | Tomato | plasma membrane | 57.33 | 57.91 |
| VIT_06s0004g00960.t01 | Wine grape | extracellular, plasma membrane, vacuole | 59.0 | 57.84 |
| KRH51014 | Soybean | extracellular, plasma membrane | 59.0 | 57.28 |
| PGSC0003DMT400082049 | Potato | extracellular, plasma membrane | 59.67 | 56.47 |
| KRH11368 | Soybean | extracellular | 14.67 | 56.41 |
| KRH02131 | Soybean | plasma membrane | 38.67 | 56.31 |
| Solyc01g006050.2.1 | Tomato | extracellular, golgi, plasma membrane | 58.0 | 55.06 |
| KRH65232 | Soybean | plasma membrane | 54.33 | 54.52 |
| Solyc01g017600.2.1 | Tomato | extracellular, plasma membrane, vacuole | 56.67 | 54.49 |
| PGSC0003DMT400048713 | Potato | extracellular, plasma membrane, vacuole | 56.33 | 53.99 |
| KRH36022 | Soybean | plasma membrane | 54.0 | 53.29 |
| KRG90737 | Soybean | plasma membrane | 54.0 | 52.26 |
| Zm00001d020652_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 54.33 | 51.26 |
| EER98987 | Sorghum | endoplasmic reticulum, plasma membrane | 54.0 | 50.62 |
| TraesCS3A01G084100.1 | Wheat | plasma membrane | 51.67 | 49.21 |
| Os08t0462800-01 | Rice | extracellular, plasma membrane | 51.67 | 49.21 |
| Solyc01g006070.2.1 | Tomato | extracellular, plasma membrane | 50.33 | 49.03 |
| TraesCS5B01G229600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 51.67 | 48.9 |
| TraesCS5D01G236600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 51.67 | 48.74 |
| TraesCS5A01G231300.1 | Wheat | plasma membrane | 51.33 | 48.73 |
| HORVU5Hr1G066720.1 | Barley | endoplasmic reticulum | 52.33 | 48.31 |
| TraesCS5A01G231100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 51.0 | 48.27 |
| Os09t0444900-01 | Rice | peroxisome, plasma membrane | 55.0 | 47.28 |
| OQU80608 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 50.0 | 47.17 |
| EER98986 | Sorghum | endoplasmic reticulum, plasma membrane | 47.33 | 46.1 |
| Zm00001d020651_P001 | Maize | plasma membrane | 42.67 | 41.56 |
| Zm00001d035422_P001 | Maize | extracellular | 24.67 | 40.0 |
| TraesCS5A01G231200.1 | Wheat | plasma membrane | 41.33 | 39.37 |
| Os09t0444800-01 | Rice | mitochondrion, plasma membrane, plastid | 40.67 | 38.73 |
| TraesCS5B01G229500.1 | Wheat | plasma membrane | 40.67 | 38.73 |
| TraesCS5D01G236700.1 | Wheat | plasma membrane | 40.33 | 38.41 |
| OQU93027 | Sorghum | extracellular | 20.0 | 38.22 |
| HORVU5Hr1G066680.1 | Barley | extracellular, plasma membrane | 40.0 | 37.74 |
| AT1G49470.1 | Thale cress | plasma membrane | 37.0 | 36.76 |
| EER98982 | Sorghum | cytosol, peroxisome, plasma membrane | 42.0 | 35.8 |
| OQU84010 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 36.67 | 33.95 |
| HORVU5Hr1G066700.1 | Barley | plastid | 25.0 | 29.07 |
| KXG29783 | Sorghum | extracellular, plasma membrane | 27.33 | 27.06 |
| AT1G32127.1 | Thale cress | plasma membrane | 23.67 | 26.89 |
| Zm00001d048662_P001 | Maize | plasma membrane | 30.0 | 26.47 |
| AT3G01360.1 | Thale cress | extracellular, plasma membrane, plastid | 17.67 | 16.61 |
Protein Annotations
| MapMan:35.2 | EntrezGene:841966 | UniProt:A0A178WE54 | ProteinID:AAG51578.1 | ProteinID:AAX23787.1 | ProteinID:AEE33208.1 |
| ArrayExpress:AT1G55230 | EnsemblPlantsGene:AT1G55230 | RefSeq:AT1G55230 | TAIR:AT1G55230 | RefSeq:AT1G55230-TAIR-G | EnsemblPlants:AT1G55230.1 |
| TAIR:AT1G55230.1 | EMBL:AY630767 | Unigene:At.50799 | InterPro:DUF716_TMEM45 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_175919.1 | ProteinID:OAP16658.1 | PFAM:PF04819 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF27 |
| UniProt:Q9C893 | TMHMM:TMhelix | UniParc:UPI00000AA4F5 | : | : | : |
Description
Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
Coordinates
chr1:+:20602819..20604033
Molecular Weight (calculated)
33766.1 Da
IEP (calculated)
7.477
GRAVY (calculated)
0.305
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.