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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • plastid 2
  • extracellular 4
  • plasma membrane 5
  • endoplasmic reticulum 3
  • vacuole 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g006050.2.1 Tomato extracellular, golgi, plasma membrane 93.69 93.99
PGSC0003DMT400048713 Potato extracellular, plasma membrane, vacuole 70.35 71.25
VIT_02s0087g00750.t01 Wine grape extracellular, plasma membrane 61.2 63.4
KRH51013 Soybean extracellular, plasma membrane 62.15 63.14
KRH20920 Soybean plasma membrane 61.2 62.99
GSMUA_Achr10P... Banana extracellular, plasma membrane 53.0 62.69
GSMUA_Achr7P18580_001 Banana extracellular, plasma membrane, vacuole 53.63 62.27
VIT_06s0004g00960.t01 Wine grape extracellular, plasma membrane, vacuole 58.99 61.11
KRH51014 Soybean extracellular, plasma membrane 59.31 60.84
CDY08230 Canola plasma membrane 54.57 60.49
KRH11368 Soybean extracellular 14.83 60.26
CDY26121 Canola extracellular, plasma membrane, vacuole 59.94 60.13
AT1G55230.1 Thale cress plasma membrane 56.47 59.67
GSMUA_Achr5P23140_001 Banana endoplasmic reticulum, extracellular, plasma membrane 58.36 59.29
GSMUA_Achr3P07810_001 Banana extracellular, plasma membrane 58.04 59.16
AT5G19870.1 Thale cress plasma membrane 51.1 58.7
Bra011903.1-P Field mustard cytosol 41.64 57.14
CDY44949 Canola extracellular, plasma membrane 53.31 55.96
KRH36022 Soybean plasma membrane 53.63 55.92
KRH02131 Soybean plasma membrane 36.28 55.83
CDY42309 Canola plasma membrane 53.0 55.63
Bra020070.1-P Field mustard extracellular, plasma membrane 53.0 55.63
Zm00001d020652_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 55.2 55.03
KRG90737 Soybean plasma membrane 53.63 54.84
Bra030875.1-P Field mustard extracellular, plasma membrane 53.31 54.69
AT1G55240.1 Thale cress plasma membrane 53.63 54.66
EER98987 Sorghum endoplasmic reticulum, plasma membrane 54.89 54.38
TraesCS5A01G231100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 54.26 54.26
TraesCS5A01G231300.1 Wheat plasma membrane 53.94 54.11
TraesCS5B01G229600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 53.94 53.94
TraesCS5D01G236600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 53.94 53.77
KRH65232 Soybean plasma membrane 50.47 53.51
TraesCS3A01G084100.1 Wheat plasma membrane 52.37 52.7
CDY10580 Canola endoplasmic reticulum, plasma membrane, vacuole 49.53 52.68
CDY65755 Canola endoplasmic reticulum, extracellular, plasma membrane 47.0 51.56
CDY10576 Canola endoplasmic reticulum, extracellular, plasma membrane 47.0 51.56
CDY10579 Canola plasma membrane 46.69 51.21
Os08t0462800-01 Rice extracellular, plasma membrane 49.53 49.84
EER98986 Sorghum endoplasmic reticulum, plasma membrane 48.27 49.68
HORVU5Hr1G066720.1 Barley endoplasmic reticulum 50.79 49.54
Os09t0444900-01 Rice peroxisome, plasma membrane 54.26 49.28
CDY65753 Canola plasma membrane 47.0 48.85
OQU80608 Sorghum endoplasmic reticulum, extracellular, plasma membrane 47.32 47.17
Zm00001d020651_P001 Maize plasma membrane 41.64 42.86
OQU93027 Sorghum extracellular 20.82 42.04
TraesCS5A01G231200.1 Wheat plasma membrane 41.64 41.9
HORVU5Hr1G066680.1 Barley extracellular, plasma membrane 41.32 41.2
TraesCS5B01G229500.1 Wheat plasma membrane 40.69 40.95
TraesCS5D01G236700.1 Wheat plasma membrane 40.06 40.32
Os09t0444800-01 Rice mitochondrion, plasma membrane, plastid 39.43 39.68
Zm00001d035422_P001 Maize extracellular 23.03 39.46
EER98982 Sorghum cytosol, peroxisome, plasma membrane 40.69 36.65
PGSC0003DMT400015915 Potato extracellular, plasma membrane 30.91 33.45
OQU84010 Sorghum endoplasmic reticulum, extracellular, plasma membrane 33.12 32.41
HORVU5Hr1G066700.1 Barley plastid 26.18 32.17
PGSC0003DMT400079341 Potato extracellular, plasma membrane 26.18 30.29
Zm00001d048662_P001 Maize plasma membrane 29.97 27.94
KXG29783 Sorghum extracellular, plasma membrane 23.97 25.08
PGSC0003DMT400003263 Potato plasma membrane 22.4 21.13
Protein Annotations
EnsemblPlants:PGSC0003DMT400082049EnsemblPlantsGene:PGSC0003DMG400032228EntrezGene:102579654GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:DUF716_TMEM45ncoils:CoilPANTHER:PTHR16007PANTHER:PTHR16007:SF27PFAM:PF04819PGSC:PGSC0003DMG400032228
RefSeq:XP_006354164.1SEG:segTMHMM:TMhelixUniParc:UPI00029577D1UniProt:M1D5I9MapMan:35.2
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400032228]
Coordinates
chr1:-:1566932..1568441
Molecular Weight (calculated)
36436.7 Da
IEP (calculated)
6.922
GRAVY (calculated)
0.264
Length
317 amino acids
Sequence
(BLAST)
001: MGTLVGHVAP GFGFFLIGIW HLINHIRLHV LHPKSYTSLP WFPTSRIRYL ELFLIMGSCL ASISMELFIG PKKHQPLDID GTIPSNHLHN FEHSNISLTF
101: FVYALFTIIF DKVTLQPQTK HGMTQLLGAI AFSQQLLLFH LHSSDHMGVE GQYHWLLQIA IFVCLATTLL GIQFPKSFLN SFVRSYSIMF QGIWLMVMGF
201: MLWTPKFIPK GCFINFEEGH KVVRCENDEA LERAKALVNI QFSWYIVGIT IFCVTLYLIL IKIFQEKIEY QSLNSNFEEI EDDLEDVEAQ KSSKNGVESN
301: RFLETGKLFV STSSMER
Best Arabidopsis Sequence Match ( AT1G55230.1 )
(BLAST)
001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG
Arabidopsis Description
Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.