Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65755 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 100.0 | 100.0 |
| CDY10579 | Canola | plasma membrane | 98.96 | 98.96 |
| CDY65753 | Canola | plasma membrane | 98.62 | 93.44 |
| Bra030875.1-P | Field mustard | extracellular, plasma membrane | 85.81 | 80.26 |
| CDY10580 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 69.2 | 67.11 |
| AT1G55240.1 | Thale cress | plasma membrane | 70.59 | 65.59 |
| CDY26121 | Canola | extracellular, plasma membrane, vacuole | 65.05 | 59.49 |
| CDY08230 | Canola | plasma membrane | 58.13 | 58.74 |
| GSMUA_Achr7P18580_001 | Banana | extracellular, plasma membrane, vacuole | 51.21 | 54.21 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 50.17 | 54.1 |
| VIT_02s0087g00750.t01 | Wine grape | extracellular, plasma membrane | 55.36 | 52.29 |
| KRH11368 | Soybean | extracellular | 13.84 | 51.28 |
| KRH20920 | Soybean | plasma membrane | 54.33 | 50.97 |
| GSMUA_Achr5P23140_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 54.67 | 50.64 |
| VIT_06s0004g00960.t01 | Wine grape | extracellular, plasma membrane, vacuole | 53.29 | 50.33 |
| KRH51013 | Soybean | extracellular, plasma membrane | 54.33 | 50.32 |
| CDY44949 | Canola | extracellular, plasma membrane | 51.9 | 49.67 |
| Solyc04g014520.1.1 | Tomato | plasma membrane | 50.87 | 49.49 |
| GSMUA_Achr3P07810_001 | Banana | extracellular, plasma membrane | 52.94 | 49.2 |
| KRH51014 | Soybean | extracellular, plasma membrane | 52.6 | 49.19 |
| CDY42309 | Canola | plasma membrane | 51.21 | 49.01 |
| PGSC0003DMT400082049 | Potato | extracellular, plasma membrane | 51.56 | 47.0 |
| Solyc01g017600.2.1 | Tomato | extracellular, plasma membrane, vacuole | 50.52 | 46.79 |
| TraesCS3A01G084100.1 | Wheat | plasma membrane | 50.52 | 46.35 |
| PGSC0003DMT400048713 | Potato | extracellular, plasma membrane, vacuole | 50.17 | 46.33 |
| Solyc01g006050.2.1 | Tomato | extracellular, golgi, plasma membrane | 50.17 | 45.89 |
| OQU80608 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 50.17 | 45.6 |
| TraesCS5A01G231300.1 | Wheat | plasma membrane | 49.83 | 45.57 |
| TraesCS5A01G231100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 49.83 | 45.43 |
| Os08t0462800-01 | Rice | extracellular, plasma membrane | 49.48 | 45.4 |
| TraesCS5D01G236600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 49.83 | 45.28 |
| TraesCS5B01G229600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 49.48 | 45.11 |
| Zm00001d020652_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 49.48 | 44.97 |
| KRH02131 | Soybean | plasma membrane | 31.83 | 44.66 |
| KRH65232 | Soybean | plasma membrane | 45.67 | 44.15 |
| HORVU5Hr1G066720.1 | Barley | endoplasmic reticulum | 49.48 | 44.0 |
| KRH36022 | Soybean | plasma membrane | 46.02 | 43.75 |
| EER98987 | Sorghum | endoplasmic reticulum, plasma membrane | 48.44 | 43.75 |
| KRG90737 | Soybean | plasma membrane | 46.71 | 43.55 |
| Zm00001d035422_P001 | Maize | extracellular | 26.99 | 42.16 |
| Zm00001d020651_P001 | Maize | plasma membrane | 44.64 | 41.88 |
| Solyc01g006070.2.1 | Tomato | extracellular, plasma membrane | 44.29 | 41.56 |
| EER98986 | Sorghum | endoplasmic reticulum, plasma membrane | 44.29 | 41.56 |
| Os09t0444800-01 | Rice | mitochondrion, plasma membrane, plastid | 44.64 | 40.95 |
| Os09t0444900-01 | Rice | peroxisome, plasma membrane | 48.79 | 40.4 |
| TraesCS5B01G229500.1 | Wheat | plasma membrane | 43.25 | 39.68 |
| TraesCS5A01G231200.1 | Wheat | plasma membrane | 43.25 | 39.68 |
| TraesCS5D01G236700.1 | Wheat | plasma membrane | 42.91 | 39.37 |
| OQU93027 | Sorghum | extracellular | 21.11 | 38.85 |
| HORVU5Hr1G066680.1 | Barley | extracellular, plasma membrane | 42.21 | 38.36 |
| EER98982 | Sorghum | cytosol, peroxisome, plasma membrane | 44.98 | 36.93 |
| CDY16500 | Canola | plasma membrane | 34.6 | 33.44 |
| CDX77245 | Canola | plasma membrane | 33.91 | 32.78 |
| OQU84010 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 35.29 | 31.48 |
| CDY35545 | Canola | extracellular, plasma membrane | 27.68 | 30.77 |
| CDY29937 | Canola | plasma membrane | 27.68 | 30.3 |
| HORVU5Hr1G066700.1 | Barley | plastid | 23.88 | 26.74 |
| Zm00001d048662_P001 | Maize | plasma membrane | 29.76 | 25.29 |
| KXG29783 | Sorghum | extracellular, plasma membrane | 25.26 | 24.09 |
| CDY37527 | Canola | endoplasmic reticulum, extracellular, plasma membrane, plastid | 17.3 | 15.87 |
| CDY49048 | Canola | plasma membrane | 16.95 | 15.56 |
Protein Annotations
| EnsemblPlants:CDY10576 | EnsemblPlantsGene:GSBRNA2T00032541001 | GO:A0A078FB13 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF716_TMEM45 | PANTHER:PTHR16007 | PANTHER:PTHR16007:SF27 | PFAM:PF04819 | ProteinID:CDY10576 | ProteinID:CDY10576.1 |
| ProteinID:CDY65755.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDD5FF | UniProt:A0A078FB13 | MapMan:35.2 |
Description
BnaC03g70380DBnaAnng21050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB13]
Coordinates
chrLK032004:-:508545..510615
Molecular Weight (calculated)
32535.1 Da
IEP (calculated)
8.491
GRAVY (calculated)
0.549
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTLVGHVLP GLAFLALGLW HLFNNIKLFC LRPNIFYSSI WFPVSKIRYL ELYFIMFSSS ASISMELFVG PRKHQPFDSD GTIPSNHLHN FEHSFISMSF
101: LVYAVLALVL DRARPRAPAS EGLTILAAAA AFSQELLLFH FHSTDHVGFE GQYHLILQLI IFVSLLTTLM GVALPKSFLV SLVRSSSIAF QGVWFIFLGC
201: MLYTPSLIPK GCFIYVEDGH QLVNCSTQEA LHRAKALFGL SILDNTIAVV GSMVFRFWIY NSCSRTALKL CMKHVELWSQ VSRNRCLSE
101: LVYAVLALVL DRARPRAPAS EGLTILAAAA AFSQELLLFH FHSTDHVGFE GQYHLILQLI IFVSLLTTLM GVALPKSFLV SLVRSSSIAF QGVWFIFLGC
201: MLYTPSLIPK GCFIYVEDGH QLVNCSTQEA LHRAKALFGL SILDNTIAVV GSMVFRFWIY NSCSRTALKL CMKHVELWSQ VSRNRCLSE
001: MGSFLGHVLP GFAFVALGLW HLFNNIKLFC LHPNTFSSST WFPISKLRHL ELYLIMLSST ASISMELFIG PRRHHPFDVD GTIPSNHLHN FEHSSISMSF
101: LVYAVLALVL DRARPRAAAS EGLTMLAAAA AFSQQLLLFH FHSTDHMGVE GQYHVILQVV IFVSLLTTIM GIFLPKSFLV SLVRSSSIAF QGVWLIVIGC
201: MLYTPSLIPK GCYIHDEGRH IIVKCSTEEA LHRAKSLVNL EFSWLFVTNT LFVVTLYLIL DRVYGENVEY SSLTTNNQTY QDDEEQHFES KSTQKTSFVQ
301: MGKLVGHGQK M
101: LVYAVLALVL DRARPRAAAS EGLTMLAAAA AFSQQLLLFH FHSTDHMGVE GQYHVILQVV IFVSLLTTIM GIFLPKSFLV SLVRSSSIAF QGVWLIVIGC
201: MLYTPSLIPK GCYIHDEGRH IIVKCSTEEA LHRAKSLVNL EFSWLFVTNT LFVVTLYLIL DRVYGENVEY SSLTTNNQTY QDDEEQHFES KSTQKTSFVQ
301: MGKLVGHGQK M
Arabidopsis Description
At1g55240 [Source:UniProtKB/TrEMBL;Acc:Q6NM31]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.