CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84010	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	57.1	53.4
Zm00001d048662_P001	Maize	plasma membrane	53.14	47.35
EER98982	Sorghum	cytosol, peroxisome, plasma membrane	36.96	31.82
GSMUA_Achr5P23140_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	30.36	29.49
GSMUA_Achr3P07810_001	Banana	extracellular, plasma membrane	29.7	28.94
EER98987	Sorghum	endoplasmic reticulum, plasma membrane	30.36	28.75
EER98986	Sorghum	endoplasmic reticulum, plasma membrane	29.04	28.57
VIT_06s0004g00960.t01	Wine grape	extracellular, plasma membrane, vacuole	28.71	28.43
OQU80608	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	29.7	28.3
KRH02131	Soybean	plasma membrane	18.81	27.67
KRH20920	Soybean	plasma membrane	28.05	27.6
AT5G19870.1	Thale cress	plasma membrane	25.08	27.54
AT1G55230.1	Thale cress	plasma membrane	27.06	27.33
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	24.09	27.24
GSMUA_Achr7P18580_001	Banana	extracellular, plasma membrane, vacuole	24.42	27.11
KRH11368	Soybean	extracellular	6.93	26.92
Solyc01g017600.2.1	Tomato	extracellular, plasma membrane, vacuole	27.39	26.6
AT1G55240.1	Thale cress	plasma membrane	27.06	26.37
CDY44949	Canola	extracellular, plasma membrane	26.07	26.16
CDY42309	Canola	plasma membrane	26.07	26.16
KRH65232	Soybean	plasma membrane	25.74	26.09
KRH51013	Soybean	extracellular, plasma membrane	26.73	25.96
CDY10580	Canola	endoplasmic reticulum, plasma membrane, vacuole	25.41	25.84
Bra020070.1-P	Field mustard	extracellular, plasma membrane	25.74	25.83
KRH36022	Soybean	plasma membrane	25.74	25.66
KRH51014	Soybean	extracellular, plasma membrane	26.07	25.57
Bra030875.1-P	Field mustard	extracellular, plasma membrane	26.07	25.57
VIT_02s0087g00750.t01	Wine grape	extracellular, plasma membrane	25.74	25.49
CDY26121	Canola	extracellular, plasma membrane, vacuole	26.4	25.32
CDY10576	Canola	endoplasmic reticulum, extracellular, plasma membrane	24.09	25.26
CDY65755	Canola	endoplasmic reticulum, extracellular, plasma membrane	24.09	25.26
PGSC0003DMT400048713	Potato	extracellular, plasma membrane, vacuole	25.74	24.92
CDY10579	Canola	plasma membrane	23.76	24.91
Solyc04g014520.1.1	Tomato	plasma membrane	24.09	24.58
KRG90737	Soybean	plasma membrane	25.08	24.52
Solyc01g006050.2.1	Tomato	extracellular, golgi, plasma membrane	25.08	24.05
PGSC0003DMT400082049	Potato	extracellular, plasma membrane	25.08	23.97
CDY08230	Canola	plasma membrane	22.44	23.78
Solyc01g006070.2.1	Tomato	extracellular, plasma membrane	24.09	23.7
CDY65753	Canola	plasma membrane	23.76	23.61
Bra011903.1-P	Field mustard	cytosol	16.83	22.08
OQU93027	Sorghum	extracellular	10.89	21.02
EES10142	Sorghum	extracellular, plasma membrane, plastid	18.48	18.79
OQU80610	Sorghum	plasma membrane	21.12	18.5
EES15542	Sorghum	extracellular, plasma membrane	16.83	17.29
OQU76145	Sorghum	extracellular, plasma membrane, plastid	14.19	14.29

Protein Annotations

EnsemblPlants:KXG29783	EnsemblPlantsGene:SORBI_3004G089600	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF716_TMEM45
PANTHER:PTHR16007	PANTHER:PTHR16007:SF35	PFAM:PF04819	ProteinID:KXG29783	ProteinID:KXG29783.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0007F30A9A	UniProt:A0A194YNH2	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr4:-:7607834..7609352

Molecular Weight (calculated)

32869.8 Da

IEP (calculated)

7.961

GRAVY (calculated)

0.078

Length

303 amino acids

Sequence
(BLAST)

001: MDKIISHVLA GVMLSGLGLW HLFNHIRLFD RLPCPDITTV FIMLAYSPMP FDAADGSIPP ERMPNHEHAI IYASLLIYAG SAMYLDRHHA RHRHRHIDAL
101: HAPPGGGLRA GAVRVPRPLH RPRRPASRAG STGSCRPLPP SASPPRALLG AGRLPAELQL AVSLVRSASL AFQGLWGVVI AWIPAGMAPK GCSLDDDGGG
201: VNLRCHGDDS LHHAVAVVNL QFGWCMVLMT VFVLAFYVHA CKKYPAGEAT TTIATYLYGR LPEAQWRSQN LNISWVFLEI PGIASVSAYA EAEAADGDDD
301: HHN

Best Arabidopsis Sequence Match ( AT1G55240.1 )
(BLAST)

001: MGSFLGHVLP GFAFVALGLW HLFNNIKLFC LHPNTFSSST WFPISKLRHL ELYLIMLSST ASISMELFIG PRRHHPFDVD GTIPSNHLHN FEHSSISMSF
101: LVYAVLALVL DRARPRAAAS EGLTMLAAAA AFSQQLLLFH FHSTDHMGVE GQYHVILQVV IFVSLLTTIM GIFLPKSFLV SLVRSSSIAF QGVWLIVIGC
201: MLYTPSLIPK GCYIHDEGRH IIVKCSTEEA LHRAKSLVNL EFSWLFVTNT LFVVTLYLIL DRVYGENVEY SSLTTNNQTY QDDEEQHFES KSTQKTSFVQ
301: MGKLVGHGQK M

Arabidopsis Description

At1g55240 [Source:UniProtKB/TrEMBL;Acc:Q6NM31]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.