CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048804_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	81.21	81.76
EES15542	Sorghum	extracellular, plasma membrane	68.46	69.15
KRH76363	Soybean	extracellular, plasma membrane	55.7	59.71
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	60.07	59.67
KRH39651	Soybean	plasma membrane	54.7	58.63
AT1G32127.1	Thale cress	plasma membrane	50.67	57.2
CDY35545	Canola	extracellular, plasma membrane	49.33	56.54
CDY29937	Canola	plasma membrane	50.0	56.44
KRH07683	Soybean	extracellular	51.01	56.09
VIT_06s0009g01520.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	22.48	55.83
Bra033853.1-P	Field mustard	extracellular, plasma membrane	49.33	55.68
VIT_03s0063g02210.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, mitochondrion	16.78	55.56
PGSC0003DMT400079341	Potato	extracellular, plasma membrane	49.66	54.01
Solyc08g075970.2.1	Tomato	extracellular, plasma membrane	49.66	54.01
VIT_02s0033g00010.t01	Wine grape	extracellular, plasma membrane	28.86	53.75
VIT_02s0033g00020.t01	Wine grape	endoplasmic reticulum, extracellular	17.79	50.96
OQU80608	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	32.89	30.82
EER98987	Sorghum	endoplasmic reticulum, plasma membrane	31.21	29.06
EER98986	Sorghum	endoplasmic reticulum, plasma membrane	28.19	27.27
EER98982	Sorghum	cytosol, peroxisome, plasma membrane	30.54	25.85
OQU93027	Sorghum	extracellular	13.42	25.48
OQU84010	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	26.85	24.69
OQU80610	Sorghum	plasma membrane	27.85	23.99
OQU76145	Sorghum	extracellular, plasma membrane, plastid	21.14	20.93
KXG29783	Sorghum	extracellular, plasma membrane	18.79	18.48

Protein Annotations

EnsemblPlants:EES10142	EnsemblPlantsGene:SORBI_3005G193800	EntrezGene:8079131	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF43	PFAM:PF04819	ProteinID:AAM94299.1	ProteinID:EES10142
ProteinID:EES10142.1	RefSeq:XP_002451154.1	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	unigene:Sbi.4378
UniParc:UPI00000A08CD	UniProt:Q8LJZ5	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:67717485..67721396

Molecular Weight (calculated)

32236.2 Da

IEP (calculated)

6.378

GRAVY (calculated)

0.515

Length

298 amino acids

Sequence
(BLAST)

001: MGSFKGHVLP GTLFLLVGLW RVWCSASRHA ASPSTFRVRA WNPVRTTTSS SPLRLLELYV VAGGAFADMC VEVLYSTHLR IFVDGGEVNP AHLNDLEHGG
101: MLLMFFLFGA LALASQLWPR YLPLTDGALC LVAATAFTAE LVLFYFHSTT HMGLEGYYHY LLVVLVALCV AATVLGALLP ASFPVDLASG VLIALQGLWF
201: YQTAFTLYGP MLPAGCARDA DGHIDCHARA AQERAEQLAN FQFFGLVFLA FCYVLGCYAV AAARYGHPEL AAMHDKHVAA MEGHGDAGGG DRQEECAI

Best Arabidopsis Sequence Match ( AT1G32127.2 )
(BLAST)

001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR

Arabidopsis Description

Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.