CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 7
extracellular 4
endoplasmic reticulum 5
vacuole 4
golgi 4
mitochondrion 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, mitochondrion, nucleus, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98987	Sorghum	endoplasmic reticulum, plasma membrane	75.97	73.12
TraesCS5B01G229600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	71.75	69.72
TraesCS5A01G231100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	71.75	69.72
TraesCS5A01G231300.1	Wheat	plasma membrane	70.13	68.35
TraesCS5D01G236600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.45	68.24
OQU93027	Sorghum	extracellular	33.44	65.61
TraesCS3A01G084100.1	Wheat	plasma membrane	66.88	65.4
HORVU5Hr1G066720.1	Barley	endoplasmic reticulum	68.51	64.92
Os09t0444900-01	Rice	peroxisome, plasma membrane	73.05	64.47
OQU80608	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	60.39	58.49
GSMUA_Achr3P07810_001	Banana	extracellular, plasma membrane	56.82	56.27
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	48.05	55.22
GSMUA_Achr5P23140_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	55.84	55.13
GSMUA_Achr7P18580_001	Banana	extracellular, plasma membrane, vacuole	48.38	54.58
AT5G19870.1	Thale cress	plasma membrane	45.13	50.36
VIT_02s0087g00750.t01	Wine grape	extracellular, plasma membrane	49.35	49.67
Solyc01g006050.2.1	Tomato	extracellular, golgi, plasma membrane	50.32	49.05
KRH51013	Soybean	extracellular, plasma membrane	49.68	49.04
VIT_06s0004g00960.t01	Wine grape	extracellular, plasma membrane, vacuole	48.7	49.02
Solyc04g014520.1.1	Tomato	plasma membrane	47.08	48.82
KRH20920	Soybean	plasma membrane	48.7	48.7
PGSC0003DMT400082049	Potato	extracellular, plasma membrane	49.68	48.27
CDY08230	Canola	plasma membrane	44.48	47.9
AT1G55230.1	Thale cress	plasma membrane	46.1	47.33
KRH51014	Soybean	extracellular, plasma membrane	46.43	46.28
CDY26121	Canola	extracellular, plasma membrane, vacuole	47.4	46.2
KRH11368	Soybean	extracellular	11.69	46.15
CDY44949	Canola	extracellular, plasma membrane	45.13	46.03
Bra011903.1-P	Field mustard	cytosol	34.42	45.89
Bra020070.1-P	Field mustard	extracellular, plasma membrane	44.81	45.7
CDY42309	Canola	plasma membrane	44.81	45.7
KRH02131	Soybean	plasma membrane	30.52	45.63
Solyc01g017600.2.1	Tomato	extracellular, plasma membrane, vacuole	46.1	45.51
Bra030875.1-P	Field mustard	extracellular, plasma membrane	45.45	45.31
PGSC0003DMT400048713	Potato	extracellular, plasma membrane, vacuole	45.45	44.73
CDY10579	Canola	plasma membrane	41.88	44.64
AT1G55240.1	Thale cress	plasma membrane	44.81	44.37
CDY65755	Canola	endoplasmic reticulum, extracellular, plasma membrane	41.56	44.29
CDY10576	Canola	endoplasmic reticulum, extracellular, plasma membrane	41.56	44.29
CDY65753	Canola	plasma membrane	41.88	42.3
EER98982	Sorghum	cytosol, peroxisome, plasma membrane	48.05	42.05
CDY10580	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.58	41.95
KRH65232	Soybean	plasma membrane	39.94	41.14
KRH36022	Soybean	plasma membrane	39.61	40.13
Solyc01g006070.2.1	Tomato	extracellular, plasma membrane	39.94	39.94
KRG90737	Soybean	plasma membrane	39.94	39.68
OQU84010	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	37.66	35.8
OQU80610	Sorghum	plasma membrane	32.79	29.19
KXG29783	Sorghum	extracellular, plasma membrane	28.57	29.04
EES10142	Sorghum	extracellular, plasma membrane, plastid	27.27	28.19
EES15542	Sorghum	extracellular, plasma membrane	24.68	25.76
OQU76145	Sorghum	extracellular, plasma membrane, plastid	21.1	21.59

Protein Annotations

EnsemblPlants:EER98986	EnsemblPlantsGene:SORBI_3002G219000	EntrezGene:8062757	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF27	PFAM:PF04819	ProteinID:EER98986	ProteinID:EER98986.1
RefSeq:XP_002462465.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0001A8411C	UniProt:C5XDT0	MapMan:35.2

Description

hypothetical protein

Coordinates

chr2:-:61066315..61069203

Molecular Weight (calculated)

34134.6 Da

IEP (calculated)

6.703

GRAVY (calculated)

0.324

Length

308 amino acids

Sequence
(BLAST)

001: MGTLGGHVAP GAFFFLIGLW HLFGHSRLFL LQRGSYVAPV WFPVPGVRHI ELIMIIIGSV ISVSMELVIV QPKHQPFDDD GTIPSVHLHN FEHASISLAW
101: LVFAAATIHM DRVRAPMRDA VSQLAAAAAF AQQLLIFHFH SADHAGVQGR YHRLLEMVVA VTLAASLLLI PYQRSIALSL VRSASLVFQG VWFTVMGVMM
201: WTPALVPKGC FMNDEDGLQV VRCRTDEALD RAKSLVNLQF NWYLTGTVAF VVVFYLQMAK QYQEQPQYAP LVKGGRGSDG RCTIGEVNDD EDDLEASKGG
301: LGYIEIER

Best Arabidopsis Sequence Match ( AT1G55230.1 )
(BLAST)

001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG

Arabidopsis Description

Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.