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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • plastid 2
  • plasma membrane 7
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44949 Canola extracellular, plasma membrane 99.34 99.34
CDY42309 Canola plasma membrane 98.34 98.34
AT5G19870.1 Thale cress plasma membrane 83.77 91.67
VIT_02s0087g00750.t01 Wine grape extracellular, plasma membrane 56.62 55.88
KRH20920 Soybean plasma membrane 56.62 55.52
KRH51013 Soybean extracellular, plasma membrane 56.95 55.13
Solyc04g014520.1.1 Tomato plasma membrane 53.31 54.21
Bra011903.1-P Field mustard cytosol 41.39 54.11
KRH02131 Soybean plasma membrane 36.76 53.88
KRH51014 Soybean extracellular, plasma membrane 54.97 53.72
Solyc01g006050.2.1 Tomato extracellular, golgi, plasma membrane 55.96 53.48
PGSC0003DMT400082049 Potato extracellular, plasma membrane 55.63 53.0
VIT_06s0004g00960.t01 Wine grape extracellular, plasma membrane, vacuole 53.31 52.61
Bra030875.1-P Field mustard extracellular, plasma membrane 53.64 52.43
GSMUA_Achr7P18580_001 Banana extracellular, plasma membrane, vacuole 47.35 52.38
GSMUA_Achr5P23140_001 Banana endoplasmic reticulum, extracellular, plasma membrane 53.97 52.24
GSMUA_Achr10P... Banana extracellular, plasma membrane 46.36 52.24
KRH36022 Soybean plasma membrane 51.32 50.99
Solyc01g017600.2.1 Tomato extracellular, plasma membrane, vacuole 52.65 50.96
KRH65232 Soybean plasma membrane 50.0 50.5
PGSC0003DMT400048713 Potato extracellular, plasma membrane, vacuole 52.32 50.48
GSMUA_Achr3P07810_001 Banana extracellular, plasma membrane 51.66 50.16
KRG90737 Soybean plasma membrane 51.32 50.0
KRH11368 Soybean extracellular 11.92 46.15
Solyc01g006070.2.1 Tomato extracellular, plasma membrane 46.36 45.45
TraesCS5A01G231300.1 Wheat plasma membrane 47.35 45.25
TraesCS5B01G229600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 47.35 45.11
TraesCS5A01G231100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 47.35 45.11
Os08t0462800-01 Rice extracellular, plasma membrane 47.02 45.08
Zm00001d020652_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 47.35 44.97
EER98986 Sorghum endoplasmic reticulum, plasma membrane 45.7 44.81
HORVU5Hr1G066720.1 Barley endoplasmic reticulum 48.01 44.62
EER98987 Sorghum endoplasmic reticulum, plasma membrane 46.69 44.06
OQU80608 Sorghum endoplasmic reticulum, extracellular, plasma membrane 46.36 44.03
TraesCS5D01G236600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 46.03 43.71
TraesCS3A01G084100.1 Wheat plasma membrane 45.03 43.17
TraesCS5A01G231200.1 Wheat plasma membrane 44.37 42.54
TraesCS5B01G229500.1 Wheat plasma membrane 44.37 42.54
Zm00001d020651_P001 Maize plasma membrane 43.38 42.53
TraesCS5D01G236700.1 Wheat plasma membrane 44.04 42.22
HORVU5Hr1G066680.1 Barley extracellular, plasma membrane 43.71 41.51
Os09t0444900-01 Rice peroxisome, plasma membrane 47.68 41.26
Zm00001d035422_P001 Maize extracellular 25.17 41.08
Os09t0444800-01 Rice mitochondrion, plasma membrane, plastid 42.38 40.63
EER98982 Sorghum cytosol, peroxisome, plasma membrane 43.05 36.93
OQU93027 Sorghum extracellular 18.54 35.67
OQU84010 Sorghum endoplasmic reticulum, extracellular, plasma membrane 36.09 33.64
Bra014190.1-P Field mustard plasma membrane 32.45 32.78
HORVU5Hr1G066700.1 Barley plastid 26.49 31.01
Bra033853.1-P Field mustard extracellular, plasma membrane 25.5 29.17
Zm00001d048662_P001 Maize plasma membrane 30.79 27.35
KXG29783 Sorghum extracellular, plasma membrane 25.83 25.74
Bra039124.1-P Field mustard plasma membrane 16.23 15.56
Protein Annotations
EnsemblPlants:Bra020070.1EnsemblPlants:Bra020070.1-PEnsemblPlantsGene:Bra020070GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:DUF716_TMEM45PANTHER:PTHR16007PANTHER:PTHR16007:SF27PFAM:PF04819SEG:segTMHMM:TMhelix
UniParc:UPI00025432F0UniProt:M4DU77MapMan:35.2:::
Description
AT5G19870 (E=1e-107) | unknown protein
Coordinates
chrA02:-:4904303..4905211
Molecular Weight (calculated)
34346.2 Da
IEP (calculated)
7.746
GRAVY (calculated)
0.463
Length
302 amino acids
Sequence
(BLAST)
001: MGTLVGHIVP GFFFFALGLW HLFNHIKVFS LHPKSYVSCT WFPLSKPRYL EPLVIIIASS LSISVELFLG QKNHQPFDPN DGTIPSNHLH NFEHSCISIT
101: FITYAAFAII FDKTRPVAHR DLINLIGALA FAQQLFLFHF HSSDHTGVEG HYHLLLQLVV FVSLVTTLLG IALPSSFLVS FVRSLSISFQ GIWLMSMACM
201: LWTPSLVPKD CFLHIEEGKY TIRCSSVKGL HRALSLVNIQ FSLFLVGVTI FAMWFYIFLQ RIYGEKIEYS ELRTKESKDI EIMMTMVEVH DTESRNGVKS
301: LA
Best Arabidopsis Sequence Match ( AT5G19870.1 )
(BLAST)
001: MGTLVGHILP GFFFFALGLW HLFNHIKIFS LHPKSYIAPL WFPLSKPRYL EPLVIIIASS LSISVELFLG QKNHQPFDPN DGTIPSNHLH NFEHSCISFT
101: FITYAAFAIV FDKTRPIAHR SLINLIAALA FAQQLFLFHF HSSDHTGVEG HYHLLLQLVV FVSLVTTLLG IALPSSFILS FVRSLSVSFQ GIWLMSMACM
201: LWTPSLVPKD CFLHIEEGKH TIRCSDVKAL HRAISLVNIQ FSWFLVIITI FAMWFYIFLQ RIYGEKIEYS QLRTKD
Arabidopsis Description
At5g19870 [Source:UniProtKB/TrEMBL;Acc:Q66GS4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.