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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, plastid

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane, plastid
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:mitochondrion
Plant-mPloc:nucleus, plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G229500.1 Wheat plasma membrane 76.83 76.83
TraesCS5A01G231200.1 Wheat plasma membrane 76.83 76.83
TraesCS5D01G236700.1 Wheat plasma membrane 76.19 76.19
Zm00001d020651_P001 Maize plasma membrane 73.65 75.32
HORVU5Hr1G066680.1 Barley extracellular, plasma membrane 75.87 75.16
EER98982 Sorghum cytosol, peroxisome, plasma membrane 75.87 67.9
HORVU5Hr1G066700.1 Barley plastid 47.3 57.75
Os08t0462800-01 Rice extracellular, plasma membrane 52.7 52.7
KRH11368 Soybean extracellular 12.38 50.0
GSMUA_Achr5P23140_001 Banana endoplasmic reticulum, extracellular, plasma membrane 48.57 49.04
GSMUA_Achr3P07810_001 Banana extracellular, plasma membrane 48.25 48.87
Os09t0444900-01 Rice peroxisome, plasma membrane 52.38 47.28
AT5G19870.1 Thale cress plasma membrane 40.32 46.01
GSMUA_Achr10P... Banana extracellular, plasma membrane 38.73 45.52
GSMUA_Achr7P18580_001 Banana extracellular, plasma membrane, vacuole 39.37 45.42
AT1G55240.1 Thale cress plasma membrane 44.13 44.69
CDY65755 Canola endoplasmic reticulum, extracellular, plasma membrane 40.95 44.64
CDY10576 Canola endoplasmic reticulum, extracellular, plasma membrane 40.95 44.64
Solyc04g014520.1.1 Tomato plasma membrane 41.9 44.44
Bra030875.1-P Field mustard extracellular, plasma membrane 43.49 44.34
VIT_06s0004g00960.t01 Wine grape extracellular, plasma membrane, vacuole 42.86 44.12
CDY10579 Canola plasma membrane 40.32 43.94
KRH51013 Soybean extracellular, plasma membrane 43.49 43.91
KRH51014 Soybean extracellular, plasma membrane 42.86 43.69
Solyc01g017600.2.1 Tomato extracellular, plasma membrane, vacuole 43.17 43.59
VIT_02s0087g00750.t01 Wine grape extracellular, plasma membrane 41.9 43.14
CDY08230 Canola plasma membrane 39.05 43.01
KRH20920 Soybean plasma membrane 41.9 42.86
CDY44949 Canola extracellular, plasma membrane 40.95 42.72
Bra020070.1-P Field mustard extracellular, plasma membrane 40.63 42.38
CDY42309 Canola plasma membrane 40.63 42.38
PGSC0003DMT400048713 Potato extracellular, plasma membrane, vacuole 41.9 42.17
CDY26121 Canola extracellular, plasma membrane, vacuole 41.9 41.77
CDY65753 Canola plasma membrane 40.32 41.64
Solyc01g006050.2.1 Tomato extracellular, golgi, plasma membrane 40.95 40.82
KRH02131 Soybean plasma membrane 26.67 40.78
AT1G55230.1 Thale cress plasma membrane 38.73 40.67
Bra011903.1-P Field mustard cytosol 29.52 40.26
PGSC0003DMT400082049 Potato extracellular, plasma membrane 39.68 39.43
KRH65232 Soybean plasma membrane 36.83 38.8
CDY10580 Canola endoplasmic reticulum, plasma membrane, vacuole 36.51 38.59
Solyc01g006070.2.1 Tomato extracellular, plasma membrane 37.46 38.31
KRH36022 Soybean plasma membrane 35.56 36.84
Os08t0462900-01 Rice extracellular, plasma membrane 35.56 36.36
KRG90737 Soybean plasma membrane 34.92 35.48
Os11t0621000-01 Rice extracellular, plasma membrane 28.25 28.8
Os06t0238900-01 Rice extracellular, plasma membrane 21.59 22.01
Protein Annotations
EnsemblPlants:Os09t0444800-01EnsemblPlantsGene:Os09g0444800EntrezGene:4347194GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:DUF716_TMEM45PANTHER:PTHR16007PANTHER:PTHR16007:SF35PFAM:PF04819ProteinID:BAD38316.1ProteinID:BAF25214.1
ProteinID:BAT08331.1ProteinID:EAZ44909.1RefSeq:XP_015612447.1SEG:segTMHMM:TMhelixUniParc:UPI0000426522
UniProt:Q67U55MapMan:35.2::::
Description
Protein of unknown function DUF716 family protein. (Os09t0444800-01)
Coordinates
chr9:-:16564529..16566071
Molecular Weight (calculated)
33450.3 Da
IEP (calculated)
6.717
GRAVY (calculated)
0.382
Length
315 amino acids
Sequence
(BLAST)
001: MGGGGGGTPR SSIGHILPGA GFVAVGVWHL FNHVKLFSQR PDTYVAPAWF PVPGARYLEL ALIIAGSGVE FAMEMFVGHS TLLPFAADGS IPSDRLHNHE
101: HAIICLSLAV YAAAALHLDR ARAPARGTLG LLLVAAVFAQ ELLVFHFHST DHAGVEGQFH WLLQVVVAAC LATSLLGVGY PRSFAVGLAR SACVAFHGLW
201: LAVIGAMVWV PSLVPRGCEL VREDGRDTVR CRSKESLHRA KALANLQFGW YLSFMTVFVV ALYLYVSNRY PAAEEAAYAP LQKAGAGDGD DDGDDDAHKG
301: GGAGVHGFAA LEIEV
Best Arabidopsis Sequence Match ( AT1G55240.1 )
(BLAST)
001: MGSFLGHVLP GFAFVALGLW HLFNNIKLFC LHPNTFSSST WFPISKLRHL ELYLIMLSST ASISMELFIG PRRHHPFDVD GTIPSNHLHN FEHSSISMSF
101: LVYAVLALVL DRARPRAAAS EGLTMLAAAA AFSQQLLLFH FHSTDHMGVE GQYHVILQVV IFVSLLTTIM GIFLPKSFLV SLVRSSSIAF QGVWLIVIGC
201: MLYTPSLIPK GCYIHDEGRH IIVKCSTEEA LHRAKSLVNL EFSWLFVTNT LFVVTLYLIL DRVYGENVEY SSLTTNNQTY QDDEEQHFES KSTQKTSFVQ
301: MGKLVGHGQK M
Arabidopsis Description
At1g55240 [Source:UniProtKB/TrEMBL;Acc:Q6NM31]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.