Factsheet for Os08t0462900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 2
nucleus 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80610	Sorghum	plasma membrane	73.38	65.32
GSMUA_Achr7P12360_001	Banana	plasma membrane	54.87	57.68
CDY16500	Canola	plasma membrane	45.45	46.82
Bra014190.1-P	Field mustard	plasma membrane	45.13	46.49
CDX77245	Canola	plasma membrane	44.81	46.15
KRH24549	Soybean	plasma membrane	44.16	46.1
AT1G49470.1	Thale cress	plasma membrane	45.13	46.03
PGSC0003DMT400015915	Potato	extracellular, plasma membrane	43.51	45.73
Solyc10g050430.1.1	Tomato	extracellular, plasma membrane	43.18	45.39
KRH29555	Soybean	extracellular, plasma membrane	43.18	44.93
VIT_03s0063g01730.t01	Wine grape	mitochondrion	44.81	37.0
Os08t0462800-01	Rice	extracellular, plasma membrane	36.36	35.56
Os09t0444800-01	Rice	mitochondrion, plasma membrane, plastid	36.36	35.56
Os09t0444900-01	Rice	peroxisome, plasma membrane	36.69	32.38
Os11t0621000-01	Rice	extracellular, plasma membrane	27.27	27.18
Os06t0238900-01	Rice	extracellular, plasma membrane	19.16	19.09

Protein Annotations

EMBL:AK243654	EnsemblPlants:Os08t0462900-01	EnsemblPlantsGene:Os08g0462900	EntrezGene:4345775	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF14	PFAM:PF04819	ProteinID:BAD10308.1
ProteinID:BAD10684.1	ProteinID:BAF23902.1	ProteinID:BAT05781.1	RefSeq:XP_015648714.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI000023B070	UniProt:Q6YUB6	MapMan:35.2	:	:	:

Description

Protein of unknown function DUF716 family protein. (Os08t0462900-01)

Coordinates

chr8:-:22715246..22716410

Molecular Weight (calculated)

32526.4 Da

IEP (calculated)

7.416

GRAVY (calculated)

0.575

Length

308 amino acids

Sequence
(BLAST)

001: MGTFLGHFVP GLAFAILGLW HALNTVRAYK LKGASGFRAA AWFPFPSPVP GLKHLELYLL LSFSVLAIVD QLVDFPLLSF TIQPDALEHA TMYLHLAVYA
101: SVALAADGVA ASSSHHGGAQ AQLGEVVAAL AASVFGQELF LLRFHSADHA GLEGHYHWLL QLVVTASLVS TSATVVLPRS FAVAVVRSAS VLFQGLWFIV
201: MGFALWVPAL VPRGCHGAEA GGGAMRSAVA CPTDEAARRA VVMANLQFSW VLAGVWAVTA YLCLRVGGSR SMEYRQIQAP SGGDVGALAG DGDATQSQKR
301: VFPVSDNV

Best Arabidopsis Sequence Match ( AT1G49470.1 )
(BLAST)

001: MGTFLGHFVP GLSLALLGLW HLFNTIRSYC LKGPEAFSAK FWFPFPKLKH LELILILFFS FLSITLLTLD FPNFNFSSLK PDNLEHASMF LHLIIFACFA
101: LFCELTLCSD LFSGLIGVLS ASVFAQELFL LHFHSTDHSG LEGHYHFLLQ LIAFVSFSSA LASASFPKSF SAALFLPISV MFQGCWFLNM GFMLWIPEYV
201: PRGCVSNMST STDNNRRSVY HSGAVACESP GAEIRAKALA NLQFSWMLSA ILIITCALCL KYSGKVVLPK IRSSLEYERL CRQGSDRSAT VTVEAPASSD
301: QQ

Arabidopsis Description

At1g49470 [Source:UniProtKB/TrEMBL;Acc:Q9XIB3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.