CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020651_P001	Maize	plasma membrane	81.53	93.18
TraesCS5B01G229500.1	Wheat	plasma membrane	69.89	78.1
TraesCS5A01G231200.1	Wheat	plasma membrane	69.32	77.46
HORVU5Hr1G066680.1	Barley	extracellular, plasma membrane	69.6	77.04
TraesCS5D01G236700.1	Wheat	plasma membrane	68.75	76.83
Os09t0444800-01	Rice	mitochondrion, plasma membrane, plastid	67.9	75.87
HORVU5Hr1G066700.1	Barley	plastid	41.76	56.98
OQU80608	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	45.45	50.31
EER98987	Sorghum	endoplasmic reticulum, plasma membrane	45.74	50.31
KRH11368	Soybean	extracellular	11.08	50.0
OQU84010	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	46.02	50.0
GSMUA_Achr5P23140_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	43.18	48.72
GSMUA_Achr3P07810_001	Banana	extracellular, plasma membrane	42.61	48.23
EER98986	Sorghum	endoplasmic reticulum, plasma membrane	42.05	48.05
GSMUA_Achr7P18580_001	Banana	extracellular, plasma membrane, vacuole	37.22	47.99
AT5G19870.1	Thale cress	plasma membrane	36.93	47.1
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	35.51	46.64
VIT_06s0004g00960.t01	Wine grape	extracellular, plasma membrane, vacuole	39.77	45.75
KRH20920	Soybean	plasma membrane	39.49	45.13
CDY10576	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.93	44.98
CDY65755	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.93	44.98
KRH51013	Soybean	extracellular, plasma membrane	39.77	44.87
Solyc04g014520.1.1	Tomato	plasma membrane	37.78	44.78
Bra030875.1-P	Field mustard	extracellular, plasma membrane	39.2	44.66
CDY10579	Canola	plasma membrane	36.65	44.64
AT1G55240.1	Thale cress	plasma membrane	39.2	44.37
CDY08230	Canola	plasma membrane	35.8	44.06
KRH51014	Soybean	extracellular, plasma membrane	38.35	43.69
CDY44949	Canola	extracellular, plasma membrane	37.22	43.38
VIT_02s0087g00750.t01	Wine grape	extracellular, plasma membrane	37.5	43.14
Bra020070.1-P	Field mustard	extracellular, plasma membrane	36.93	43.05
CDY42309	Canola	plasma membrane	36.93	43.05
CDY26121	Canola	extracellular, plasma membrane, vacuole	38.64	43.04
CDY10580	Canola	endoplasmic reticulum, plasma membrane, vacuole	36.36	42.95
Solyc01g017600.2.1	Tomato	extracellular, plasma membrane, vacuole	38.07	42.95
CDY65753	Canola	plasma membrane	36.65	42.3
KRH02131	Soybean	plasma membrane	24.72	42.23
OQU93027	Sorghum	extracellular	18.75	42.04
AT1G55230.1	Thale cress	plasma membrane	35.8	42.0
Solyc01g006050.2.1	Tomato	extracellular, golgi, plasma membrane	37.22	41.46
PGSC0003DMT400048713	Potato	extracellular, plasma membrane, vacuole	36.65	41.21
Bra011903.1-P	Field mustard	cytosol	26.99	41.13
PGSC0003DMT400082049	Potato	extracellular, plasma membrane	36.65	40.69
KRH36022	Soybean	plasma membrane	34.38	39.8
KRH65232	Soybean	plasma membrane	32.67	38.46
KRG90737	Soybean	plasma membrane	33.52	38.06
Solyc01g006070.2.1	Tomato	extracellular, plasma membrane	33.24	37.99
KXG29783	Sorghum	extracellular, plasma membrane	31.82	36.96
OQU80610	Sorghum	plasma membrane	31.53	32.08
EES10142	Sorghum	extracellular, plasma membrane, plastid	25.85	30.54
EES15542	Sorghum	extracellular, plasma membrane	24.72	29.49
OQU76145	Sorghum	extracellular, plasma membrane, plastid	19.03	22.26

Protein Annotations

MapMan:35.2	UniProt:C5XDS2	InterPro:DUF716_TMEM45	EnsemblPlants:EER98982	ProteinID:EER98982	ProteinID:EER98982.2
GO:GO:0003674	GO:GO:0003824	GO:GO:0004674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	PFAM:PF04819	PANTHER:PTHR16007	PANTHER:PTHR16007:SF35	EnsemblPlantsGene:SORBI_3002G218900
TMHMM:TMhelix	UniParc:UPI00081ADC5D	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:61062411..61063945

Molecular Weight (calculated)

38725.1 Da

IEP (calculated)

7.177

GRAVY (calculated)

0.332

Length

352 amino acids

Sequence
(BLAST)

001: MDRWRGEHPK KTSSKAIIDD TGPVSVVATN HHRPTGDRAM GGGTPRSSIG HILPGAGFLA VGLWHLFNHI RLFSLRPDAY VAPVWFPAPR VRHLELILVI
101: AGSAVEFAME MFVDHSTFLP FDADGSIPSD RLHNHEHAII CLALLVYAAS ALHLDRARAR CRGALSLLLV AAVFAQELLV FHFHSTDHAG FEGQFHWLLQ
201: LVVAACLATA LLGVAFPRSF VVGLVRSACV AFHGVWLIVI GAMVWVPSRV PRGCSLVEED GRVTVRCHSE ASLHRAKALA NIQFGWYLSF MTVFVVVLYV
301: NVCRMYPAET AAYVRLPPEA AGEEEEHLKR KCGVVCCDND DVQGFTPLEI EV

Best Arabidopsis Sequence Match ( AT1G55240.1 )
(BLAST)

001: MGSFLGHVLP GFAFVALGLW HLFNNIKLFC LHPNTFSSST WFPISKLRHL ELYLIMLSST ASISMELFIG PRRHHPFDVD GTIPSNHLHN FEHSSISMSF
101: LVYAVLALVL DRARPRAAAS EGLTMLAAAA AFSQQLLLFH FHSTDHMGVE GQYHVILQVV IFVSLLTTIM GIFLPKSFLV SLVRSSSIAF QGVWLIVIGC
201: MLYTPSLIPK GCYIHDEGRH IIVKCSTEEA LHRAKSLVNL EFSWLFVTNT LFVVTLYLIL DRVYGENVEY SSLTTNNQTY QDDEEQHFES KSTQKTSFVQ
301: MGKLVGHGQK M

Arabidopsis Description

At1g55240 [Source:UniProtKB/TrEMBL;Acc:Q6NM31]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.