CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020070.1-P	Field mustard	extracellular, plasma membrane	99.34	99.34
CDY42309	Canola	plasma membrane	99.01	99.01
AT5G19870.1	Thale cress	plasma membrane	84.11	92.03
CDY26121	Canola	extracellular, plasma membrane, vacuole	61.26	58.54
CDY08230	Canola	plasma membrane	53.64	56.64
VIT_02s0087g00750.t01	Wine grape	extracellular, plasma membrane	56.95	56.21
KRH20920	Soybean	plasma membrane	56.95	55.84
KRH51013	Soybean	extracellular, plasma membrane	57.28	55.45
Solyc04g014520.1.1	Tomato	plasma membrane	53.64	54.55
KRH51014	Soybean	extracellular, plasma membrane	55.3	54.05
KRH02131	Soybean	plasma membrane	36.76	53.88
Solyc01g006050.2.1	Tomato	extracellular, golgi, plasma membrane	56.29	53.8
PGSC0003DMT400082049	Potato	extracellular, plasma membrane	55.96	53.31
VIT_06s0004g00960.t01	Wine grape	extracellular, plasma membrane, vacuole	53.64	52.94
GSMUA_Achr7P18580_001	Banana	extracellular, plasma membrane, vacuole	47.68	52.75
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	46.69	52.61
GSMUA_Achr5P23140_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	54.3	52.56
CDY65755	Canola	endoplasmic reticulum, extracellular, plasma membrane	49.67	51.9
CDY10576	Canola	endoplasmic reticulum, extracellular, plasma membrane	49.67	51.9
CDY10579	Canola	plasma membrane	49.34	51.56
CDY10580	Canola	endoplasmic reticulum, plasma membrane, vacuole	50.66	51.34
Solyc01g017600.2.1	Tomato	extracellular, plasma membrane, vacuole	52.98	51.28
KRH36022	Soybean	plasma membrane	51.32	50.99
PGSC0003DMT400048713	Potato	extracellular, plasma membrane, vacuole	52.65	50.8
KRH65232	Soybean	plasma membrane	50.0	50.5
GSMUA_Achr3P07810_001	Banana	extracellular, plasma membrane	51.66	50.16
KRG90737	Soybean	plasma membrane	51.32	50.0
CDY65753	Canola	plasma membrane	49.34	48.85
KRH11368	Soybean	extracellular	12.25	47.44
Solyc01g006070.2.1	Tomato	extracellular, plasma membrane	46.69	45.78
TraesCS5A01G231300.1	Wheat	plasma membrane	47.68	45.57
TraesCS5B01G229600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	47.68	45.43
TraesCS5A01G231100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	47.68	45.43
Os08t0462800-01	Rice	extracellular, plasma membrane	47.35	45.4
Zm00001d020652_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	47.68	45.28
EER98986	Sorghum	endoplasmic reticulum, plasma membrane	46.03	45.13
HORVU5Hr1G066720.1	Barley	endoplasmic reticulum	48.34	44.92
EER98987	Sorghum	endoplasmic reticulum, plasma membrane	47.02	44.38
OQU80608	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	46.69	44.34
TraesCS5D01G236600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	46.36	44.03
TraesCS3A01G084100.1	Wheat	plasma membrane	45.36	43.49
TraesCS5B01G229500.1	Wheat	plasma membrane	44.7	42.86
TraesCS5A01G231200.1	Wheat	plasma membrane	44.7	42.86
Zm00001d020651_P001	Maize	plasma membrane	43.71	42.86
TraesCS5D01G236700.1	Wheat	plasma membrane	44.37	42.54
HORVU5Hr1G066680.1	Barley	extracellular, plasma membrane	44.04	41.82
Zm00001d035422_P001	Maize	extracellular	25.5	41.62
Os09t0444900-01	Rice	peroxisome, plasma membrane	48.01	41.55
Os09t0444800-01	Rice	mitochondrion, plasma membrane, plastid	42.72	40.95
EER98982	Sorghum	cytosol, peroxisome, plasma membrane	43.38	37.22
OQU93027	Sorghum	extracellular	18.87	36.31
OQU84010	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	36.42	33.95
CDY16500	Canola	plasma membrane	32.45	32.78
CDX77245	Canola	plasma membrane	31.79	32.11
HORVU5Hr1G066700.1	Barley	plastid	26.49	31.01
CDY35545	Canola	extracellular, plasma membrane	26.16	30.38
CDY29937	Canola	plasma membrane	25.5	29.17
Zm00001d048662_P001	Maize	plasma membrane	31.13	27.65
KXG29783	Sorghum	extracellular, plasma membrane	26.16	26.07
CDY37527	Canola	endoplasmic reticulum, extracellular, plasma membrane, plastid	16.56	15.87
CDY49048	Canola	plasma membrane	16.56	15.87

Protein Annotations

EnsemblPlants:CDY44949	EnsemblPlantsGene:GSBRNA2T00081108001	GO:A0A078I695	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF716_TMEM45	ncoils:Coil	PANTHER:PTHR16007	PANTHER:PTHR16007:SF27	PFAM:PF04819	ProteinID:CDY44949
ProteinID:CDY44949.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDB653	UniProt:A0A078I695	MapMan:35.2

Description

BnaA02g04540DBnaA02g04540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I695]

Coordinates

chrLK032606:-:181958..182866

Molecular Weight (calculated)

34334.2 Da

IEP (calculated)

7.761

GRAVY (calculated)

0.456

Length

302 amino acids

Sequence
(BLAST)

001: MGTLVGHIVP GFFFFALGLW HLFNHIKLFS LHPKSYVSCT WFPLSKPRYL EPLVIIIASS LSISVELFLG QKNHQPFDPN DGTIPSNHLH NFEHSCISIT
101: FITYAAFAII FDKTRPVAHR DLINLIGALA FAQQLFLFHF HSSDHTGVEG HYHLLLQLVV FVSLVTTLLG IALPSSFLVS FVRSLSISFQ GIWLMSMACM
201: LWTPSLVPKD CFLHIEEGKH TIRCSSVKGL HRALSLVNIQ FSLFLVGVTI FAMWFYIFLQ RIYGEKIEYS ELRTKESKDI EIMMTMVEVH DTESRNGVKS
301: LA

Best Arabidopsis Sequence Match ( AT5G19870.1 )
(BLAST)

001: MGTLVGHILP GFFFFALGLW HLFNHIKIFS LHPKSYIAPL WFPLSKPRYL EPLVIIIASS LSISVELFLG QKNHQPFDPN DGTIPSNHLH NFEHSCISFT
101: FITYAAFAIV FDKTRPIAHR SLINLIAALA FAQQLFLFHF HSSDHTGVEG HYHLLLQLVV FVSLVTTLLG IALPSSFILS FVRSLSVSFQ GIWLMSMACM
201: LWTPSLVPKD CFLHIEEGKH TIRCSDVKAL HRAISLVNIQ FSWFLVIITI FAMWFYIFLQ RIYGEKIEYS QLRTKD

Arabidopsis Description

At5g19870 [Source:UniProtKB/TrEMBL;Acc:Q66GS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.