CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 3
vacuole 4
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08230	Canola	plasma membrane	84.18	93.01
AT1G55230.1	Thale cress	plasma membrane	79.11	83.33
CDY10580	Canola	endoplasmic reticulum, plasma membrane, vacuole	65.51	69.46
VIT_02s0087g00750.t01	Wine grape	extracellular, plasma membrane	65.51	67.65
CDY10576	Canola	endoplasmic reticulum, extracellular, plasma membrane	59.49	65.05
CDY65755	Canola	endoplasmic reticulum, extracellular, plasma membrane	59.49	65.05
CDY10579	Canola	plasma membrane	59.18	64.71
GSMUA_Achr5P23140_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	62.34	63.14
GSMUA_Achr7P18580_001	Banana	extracellular, plasma membrane, vacuole	54.11	62.64
KRH51013	Soybean	extracellular, plasma membrane	61.08	61.86
KRH20920	Soybean	plasma membrane	60.13	61.69
CDY65753	Canola	plasma membrane	59.18	61.31
CDY44949	Canola	extracellular, plasma membrane	58.54	61.26
Solyc04g014520.1.1	Tomato	plasma membrane	57.28	60.94
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	51.58	60.82
CDY42309	Canola	plasma membrane	57.91	60.6
GSMUA_Achr3P07810_001	Banana	extracellular, plasma membrane	59.18	60.13
PGSC0003DMT400082049	Potato	extracellular, plasma membrane	60.13	59.94
VIT_06s0004g00960.t01	Wine grape	extracellular, plasma membrane, vacuole	57.59	59.48
KRH51014	Soybean	extracellular, plasma membrane	57.91	59.22
KRH02131	Soybean	plasma membrane	38.29	58.74
Solyc01g006050.2.1	Tomato	extracellular, golgi, plasma membrane	58.54	58.54
Solyc01g017600.2.1	Tomato	extracellular, plasma membrane, vacuole	56.65	57.37
PGSC0003DMT400048713	Potato	extracellular, plasma membrane, vacuole	56.01	56.55
KRH36022	Soybean	plasma membrane	53.16	55.26
KRH65232	Soybean	plasma membrane	52.22	55.18
KRG90737	Soybean	plasma membrane	52.85	53.87
Solyc01g006070.2.1	Tomato	extracellular, plasma membrane	51.27	52.6
Zm00001d020652_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	52.22	51.89
TraesCS5A01G231300.1	Wheat	plasma membrane	51.58	51.58
KRH11368	Soybean	extracellular	12.66	51.28
TraesCS3A01G084100.1	Wheat	plasma membrane	50.95	51.11
Os08t0462800-01	Rice	extracellular, plasma membrane	50.95	51.11
TraesCS5D01G236600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	51.27	50.94
EER98987	Sorghum	endoplasmic reticulum, plasma membrane	51.58	50.94
TraesCS5B01G229600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	50.95	50.79
TraesCS5A01G231100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	50.63	50.47
OQU80608	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	50.0	49.69
HORVU5Hr1G066720.1	Barley	endoplasmic reticulum	50.95	49.54
Os09t0444900-01	Rice	peroxisome, plasma membrane	52.53	47.56
EER98986	Sorghum	endoplasmic reticulum, plasma membrane	46.2	47.4
Zm00001d020651_P001	Maize	plasma membrane	42.41	43.51
Os09t0444800-01	Rice	mitochondrion, plasma membrane, plastid	41.77	41.9
TraesCS5A01G231200.1	Wheat	plasma membrane	40.19	40.32
OQU93027	Sorghum	extracellular	19.94	40.13
TraesCS5B01G229500.1	Wheat	plasma membrane	39.87	40.0
TraesCS5D01G236700.1	Wheat	plasma membrane	39.56	39.68
HORVU5Hr1G066680.1	Barley	extracellular, plasma membrane	39.24	38.99
Zm00001d035422_P001	Maize	extracellular	22.78	38.92
EER98982	Sorghum	cytosol, peroxisome, plasma membrane	43.04	38.64
CDY16500	Canola	plasma membrane	35.44	37.46
CDX77245	Canola	plasma membrane	35.13	37.12
OQU84010	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	34.18	33.33
HORVU5Hr1G066700.1	Barley	plastid	25.32	31.01
CDY35545	Canola	extracellular, plasma membrane	24.37	29.62
CDY29937	Canola	plasma membrane	24.05	28.79
KXG29783	Sorghum	extracellular, plasma membrane	25.32	26.4
Zm00001d048662_P001	Maize	plasma membrane	27.85	25.88
CDY37527	Canola	endoplasmic reticulum, extracellular, plasma membrane, plastid	17.72	17.78
CDY49048	Canola	plasma membrane	16.77	16.83

Protein Annotations

EnsemblPlants:CDY26121	EnsemblPlantsGene:GSBRNA2T00034759001	GO:A0A078GLC1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF27	PFAM:PF04819	ProteinID:CDY26121	ProteinID:CDY26121.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EC4188	UniProt:A0A078GLC1	MapMan:35.2	:

Description

BnaC06g10750DBnaC06g10750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLC1]

Coordinates

chrLK032185:-:391797..392747

Molecular Weight (calculated)

35616.2 Da

IEP (calculated)

6.965

GRAVY (calculated)

0.230

Length

316 amino acids

Sequence
(BLAST)

001: MGTLVGHVAP GFAFFALGLW HLYNNIKLFC LHPNTFTSSP WFPTSKLRHL ELYFIMFSSS ASIAMELFIG PKKHQPFASD GTIPSNHLHN FEHSSISMSF
101: FIYAIFALVL DQARYKAVSK GLTILAAASA FAQQLFLFHH HSADHMGIEG QYHKLLQLVI FVSLLTTLMG IALPKSFLVS FVRSSSISFQ GVWFIVMGYM
201: LWTPSLIPKG CFLHEEEGHQ VVRCSSDLAL HRAKSLVNIE FSWFFVGTTI FGMSLYLILD GVYGENIEYS SLTTKDQVEE DGEKQEDIES LKMSNPGFVQ
301: MGKIFGDRET WKGDKI

Best Arabidopsis Sequence Match ( AT1G55230.1 )
(BLAST)

001: MGTLVGHVAP GFAFFALGLW HLFNNIKLFC LNPNTFTSSP WFPTSKLRHL ELYIIMVCSS ISIASELFIG PKKHQPFDSD GTIPSNHLHN FEHSSISMSF
101: LVYAIFAVVL DQERRRSNIS HGLTMLVASS AFAQQLFLFH LHSADHMGIE GQYHKLLQLI IFVSFLTTLI GITLPKSFLV SFVRSSSITF QGVWFVVMGY
201: MLWTPSLIPK GCFLHEEEGH QVIKCSSDKA IHRAKSLVNI EFSWFFVGIT IFVMSLFLIL SGLYGENAEY SILVTKDKGE ESGEEKQDIE SLKKSKPSFG

Arabidopsis Description

Proteinase inhibitor I4, serpin (DUF716) [Source:UniProtKB/TrEMBL;Acc:Q9C893]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.