Factsheet for TraesCS2A01G466000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G466300.1	Wheat	plasma membrane	94.85	94.52
TraesCS2A01G465800.1	Wheat	plasma membrane	93.47	94.44
EES15542	Sorghum	extracellular, plasma membrane	88.32	87.12
Zm00001d036834_P002	Maize	plasma membrane	83.51	84.08
TraesCS2A01G193200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	57.04	65.87
TraesCS3A01G463700.1	Wheat	plasma membrane	63.92	63.05
KRH76363	Soybean	extracellular, plasma membrane	51.55	53.96
CDY35545	Canola	extracellular, plasma membrane	48.11	53.85
Bra033853.1-P	Field mustard	extracellular, plasma membrane	48.11	53.03
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	54.3	52.67
AT1G32127.1	Thale cress	plasma membrane	47.77	52.65
CDY29937	Canola	plasma membrane	47.77	52.65
KRH39651	Soybean	plasma membrane	50.17	52.52
PGSC0003DMT400079341	Potato	extracellular, plasma membrane	49.14	52.19
Solyc08g075970.2.1	Tomato	extracellular, plasma membrane	48.8	51.82
KRH07683	Soybean	extracellular	47.77	51.29
VIT_02s0033g00020.t01	Wine grape	endoplasmic reticulum, extracellular	17.53	49.04
VIT_02s0033g00010.t01	Wine grape	extracellular, plasma membrane	25.77	46.88
VIT_06s0009g01520.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	19.24	46.67
VIT_03s0063g02210.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, mitochondrion	12.37	40.0
TraesCS3A01G084100.1	Wheat	plasma membrane	30.93	28.57
TraesCS5A01G231300.1	Wheat	plasma membrane	29.9	27.53
TraesCS5A01G231100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	29.9	27.44
TraesCS5A01G231200.1	Wheat	plasma membrane	28.87	26.67
TraesCS7A01G195700.1	Wheat	plasma membrane	19.59	18.69

Protein Annotations

EnsemblPlants:TraesCS2A01G466000.1	EnsemblPlantsGene:TraesCS2A01G466000	InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF43	PFAM:PF04819
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr2A:+:710603332..710609646

Molecular Weight (calculated)

31181.4 Da

IEP (calculated)

6.571

GRAVY (calculated)

0.659

Length

291 amino acids

Sequence
(BLAST)

001: MGSFTGHVLP GTLFLAVGLW RVWSAVARFA ADPPAFRVRA WCPLPRRGAR LLELYVVVGG MFLDMCLELG GGVLAGRRAG VAPESSLIYL EHAGMLLMFF
101: LFGALALLSQ KRSRYLPLTD GELCLVAAAA FTLEFLLFSY HSATHTGLEG YYHHLLVILI GLCILATVLG ALLPASFPVD VAAGMLMALQ GLWFYQTALT
201: LYGPMLPAGC DRDASGHQVD CHSRAAAERA EQLANFQLFG AVFLAFVYVL GCYAVAAALY GHPDLAAMHD EHVAALECRG GGGARAEECV V

Best Arabidopsis Sequence Match ( AT1G32127.1 )
(BLAST)

001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR

Arabidopsis Description

Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.