Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G507100.1 | Wheat | plasma membrane | 87.21 | 91.41 |
| TraesCS3D01G457800.1 | Wheat | plasma membrane | 86.89 | 91.07 |
| TraesCS3A01G463700.1 | Wheat | plasma membrane | 86.56 | 89.49 |
| TraesCS2A01G193200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 71.15 | 86.11 |
| TraesCS2D01G194300.1 | Wheat | plasma membrane | 81.64 | 85.57 |
| HORVU5Hr1G077170.1 | Barley | extracellular | 38.36 | 83.57 |
| HORVU1Hr1G038410.1 | Barley | extracellular, plasma membrane | 42.3 | 74.14 |
| Os11t0621000-01 | Rice | extracellular, plasma membrane | 75.08 | 74.11 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 60.33 | 61.33 |
| KRH76363 | Soybean | extracellular, plasma membrane | 55.08 | 60.43 |
| HORVU2Hr1G036130.2 | Barley | extracellular | 37.05 | 59.47 |
| VIT_06s0009g01520.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 23.28 | 59.17 |
| KRH39651 | Soybean | plasma membrane | 53.44 | 58.63 |
| CDY35545 | Canola | extracellular, plasma membrane | 49.84 | 58.46 |
| CDY29937 | Canola | plasma membrane | 50.49 | 58.33 |
| AT1G32127.1 | Thale cress | plasma membrane | 50.16 | 57.95 |
| Bra033853.1-P | Field mustard | extracellular, plasma membrane | 49.84 | 57.58 |
| Solyc08g075970.2.1 | Tomato | extracellular, plasma membrane | 51.15 | 56.93 |
| VIT_02s0033g00010.t01 | Wine grape | extracellular, plasma membrane | 29.84 | 56.88 |
| KRH07683 | Soybean | extracellular | 50.49 | 56.83 |
| VIT_03s0063g02210.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, mitochondrion | 16.72 | 56.67 |
| PGSC0003DMT400079341 | Potato | extracellular, plasma membrane | 50.82 | 56.57 |
| VIT_02s0033g00020.t01 | Wine grape | endoplasmic reticulum, extracellular | 17.38 | 50.96 |
| HORVU2Hr1G124140.1 | Barley | cytosol, mitochondrion | 45.25 | 47.42 |
| HORVU5Hr1G066680.1 | Barley | extracellular, plasma membrane | 26.56 | 25.47 |
| HORVU5Hr1G066720.1 | Barley | endoplasmic reticulum | 26.23 | 24.62 |
| HORVU5Hr1G066700.1 | Barley | plastid | 16.07 | 18.99 |
| HORVU7Hr1G039900.1 | Barley | extracellular, mitochondrion, plastid | 19.34 | 17.4 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G099300.14 | EnsemblPlantsGene:HORVU3Hr1G099300 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF716_TMEM45 |
| PANTHER:PTHR16007 | PANTHER:PTHR16007:SF43 | PFAM:PF04819 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B4615F4 |
| UniProt:A0A287MH04 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:661186654..661190009
Molecular Weight (calculated)
33018.2 Da
IEP (calculated)
6.743
GRAVY (calculated)
0.472
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSFKGHVLP GTLFLAVGAW HVWAAVARFA TDPARFRLRV WNPVGGGGAL RHLELYVVAG GAFLDMCVEV LYSTHLRIFA PGGGVNPAHL NDLEHGGMLL
101: MFFLFGALAL LSQNTRIIRY LPLTEAALCL LAATAFTAEL MLFYFHSTTH QGLEGYYHYL LVVLIGLCVA STVLGALLPA SFPADLASGV LITLQGLWFY
201: QTAFTLYGPM LPEGCRRDAG AEIECHGHAA GERAEQLADF QLFTCVFLVF AYALGCYAVA AAKYGHPDLR TGEMEHRENG GFVGSSALST RDKHIIEGLS
301: FGTRL
101: MFFLFGALAL LSQNTRIIRY LPLTEAALCL LAATAFTAEL MLFYFHSTTH QGLEGYYHYL LVVLIGLCVA STVLGALLPA SFPADLASGV LITLQGLWFY
201: QTAFTLYGPM LPEGCRRDAG AEIECHGHAA GERAEQLADF QLFTCVFLVF AYALGCYAVA AAKYGHPDLR TGEMEHRENG GFVGSSALST RDKHIIEGLS
301: FGTRL
001: MGTLVGHILP GFFFFALGLW HLFNHIKIFS LHPKSYIAPL WFPLSKPRYL EPLVIIIASS LSISVELFLG QKNHQPFDPN DGTIPSNHLH NFEHSCISFT
101: FITYAAFAIV FDKTRPIAHR SLINLIAALA FAQQLFLFHF HSSDHTGVEG HYHLLLQLVV FVSLVTTLLG IALPSSFILS FVRSLSVSFQ GIWLMSMACM
201: LWTPSLVPKD CFLHIEEGKH TIRCSDVKAL HRAISLVNIQ FSWFLVIITI FAMWFYIFLQ RIYGEKIEYS QLRTKD
101: FITYAAFAIV FDKTRPIAHR SLINLIAALA FAQQLFLFHF HSSDHTGVEG HYHLLLQLVV FVSLVTTLLG IALPSSFILS FVRSLSVSFQ GIWLMSMACM
201: LWTPSLVPKD CFLHIEEGKH TIRCSDVKAL HRAISLVNIQ FSWFLVIITI FAMWFYIFLQ RIYGEKIEYS QLRTKD
Arabidopsis Description
At5g19870 [Source:UniProtKB/TrEMBL;Acc:Q66GS4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.