Factsheet for TraesCS2B01G487900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G465800.1	Wheat	plasma membrane	96.53	96.53
TraesCS2D01G466300.1	Wheat	plasma membrane	95.83	94.52
EES15542	Sorghum	extracellular, plasma membrane	89.93	87.8
Zm00001d036834_P002	Maize	plasma membrane	84.38	84.08
TraesCS2B01G624500.1	Wheat	extracellular, plasma membrane, vacuole	58.68	65.5
TraesCS3B01G507100.1	Wheat	plasma membrane	64.93	64.26
CDY35545	Canola	extracellular, plasma membrane	48.96	54.23
KRH76363	Soybean	extracellular, plasma membrane	51.74	53.6
Bra033853.1-P	Field mustard	extracellular, plasma membrane	48.96	53.41
AT1G32127.1	Thale cress	plasma membrane	48.61	53.03
CDY29937	Canola	plasma membrane	48.61	53.03
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	55.21	53.0
PGSC0003DMT400079341	Potato	extracellular, plasma membrane	50.35	52.92
Solyc08g075970.2.1	Tomato	extracellular, plasma membrane	50.0	52.55
KRH39651	Soybean	plasma membrane	50.35	52.16
KRH07683	Soybean	extracellular	47.92	50.92
VIT_02s0033g00020.t01	Wine grape	endoplasmic reticulum, extracellular	17.71	49.04
VIT_02s0033g00010.t01	Wine grape	extracellular, plasma membrane	26.04	46.88
VIT_06s0009g01520.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	19.44	46.67
VIT_03s0063g02210.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, mitochondrion	12.85	41.11
TraesCS5B01G229600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	30.56	27.76
TraesCS5B01G229500.1	Wheat	plasma membrane	28.12	25.71
TraesCS7B01G101400.1	Wheat	plasma membrane	19.1	18.03

Protein Annotations

EnsemblPlants:TraesCS2B01G487900.1	EnsemblPlantsGene:TraesCS2B01G487900	InterPro:DUF716_TMEM45	PANTHER:PTHR16007	PANTHER:PTHR16007:SF43	PFAM:PF04819
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr2B:+:685146969..685148388

Molecular Weight (calculated)

30714.5 Da

IEP (calculated)

5.448

GRAVY (calculated)

0.634

Length

288 amino acids

Sequence
(BLAST)

001: MGSFNGHVLP GTLFLVVGLW RVWSAVARFA ADPPSFRVRA WCPLELPGAP RLLELYVVAG GTFLDMCLEL GGGVLAGRGD GVAPESSLIY LEHAGMLLMF
101: FLFGALALLS QKRSRYLPLT DGELCLVAAA AFTSEFLLFS YHSATHTGLE GYYHHLLVIL IGLCILATVL GALLPASFPV DVAAGMLMAL QGLWFYQTAL
201: TLYGPMLPAG CDRDASGHQV DCHSRAAGER AEQLANFQLF GAVFLAFVYV LGCYAVAAAV YGHPDLAAMH EEHAAALECR GGAEECVA

Best Arabidopsis Sequence Match ( AT1G32127.1 )
(BLAST)

001: MGSFKGHALP GTLFLVVGVW HIWSSVVRYI SNPSSFRVRV WHPVPGFNDR IKYLELYVVT IGSFIDLCIE FLYSTHLKFF VNGVLNPSHM NDFEHSGMLL
101: MFFILGFIAL LSEKTRLLPL PQEALCLIAA TAFTAECLLF FFHSTSHKGL EGYYHLLLVF LIGLCVISSI AGAICPTSFP VDLCNGIAMT LQGLWFYQTA
201: FTLYGPMMPQ GCSLKQNSVV CRSVDSEVSG EFLANFQLFS LVLAVLVCVV GSYVFAASRF GVSR

Arabidopsis Description

Plant viral-response family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APW5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.